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The map label for this gene is ydaS [H]

Identifier: 222096817

GI number: 222096817

Start: 3108174

End: 3108422

Strand: Reverse

Name: ydaS [H]

Synonym: BCQ_3157

Alternate gene names: 222096817

Gene position: 3108422-3108174 (Counterclockwise)

Preceding gene: 222096819

Following gene: 222096816

Centisome position: 59.61

GC content: 36.95

Gene sequence:

>249_bases
ATGGGGTGGATTATCACATTAATAGTTGGTGCTATTATAGGTGCAATTGCAGGTTCTATTACAGGTAAAGACTTTCCTGC
TGGCATGTTTGGAAAAATAATTGCTGGTTTATTAGGAGCTTGGTTAGGCGGTAAATTATTTGGAGATTGGGGTCCATCAC
TAGGTGGTATTCATATTGTACCAGCTTTATTAGGATCAATTGTTCTCGTTCTTATTGTATCATTTGTAGTGAAAGCTGCA
AGGAAATAA

Upstream 100 bases:

>100_bases
TTTGACAAGATTTTTCTTTTTTGGATATAATAATTACATAGTTACACAATAAGTTAGTAGCTAAATTGAATTACACTATA
ATAGAAATGGAGGACTAAAG

Downstream 100 bases:

>100_bases
AGAGTTATATTATGATAAAAAGCCCTATATAAGGGCTTTTCATCATTCGAAGAGGTGGTTTTATTGGAGAAAGTAAGTTT
AAGAAAACGAGATAAGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MGWIITLIVGAIIGAIAGSITGKDFPAGMFGKIIAGLLGAWLGGKLFGDWGPSLGGIHIVPALLGSIVLVLIVSFVVKAA
RK

Sequences:

>Translated_82_residues
MGWIITLIVGAIIGAIAGSITGKDFPAGMFGKIIAGLLGAWLGGKLFGDWGPSLGGIHIVPALLGSIVLVLIVSFVVKAA
RK
>Mature_81_residues
GWIITLIVGAIIGAIAGSITGKDFPAGMFGKIIAGLLGAWLGGKLFGDWGPSLGGIHIVPALLGSIVLVLIVSFVVKAAR
K

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0410 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007341 [H]

Pfam domain/function: PF04226 Transgly_assoc [H]

EC number: NA

Molecular weight: Translated: 8283; Mature: 8152

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWIITLIVGAIIGAIAGSITGKDFPAGMFGKIIAGLLGAWLGGKLFGDWGPSLGGIHIV
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHH
PALLGSIVLVLIVSFVVKAARK
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GWIITLIVGAIIGAIAGSITGKDFPAGMFGKIIAGLLGAWLGGKLFGDWGPSLGGIHIV
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHH
PALLGSIVLVLIVSFVVKAARK
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]