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The map label for this gene is trpS [H]

Identifier: 222096814

GI number: 222096814

Start: 3105241

End: 3106239

Strand: Reverse

Name: trpS [H]

Synonym: BCQ_3154

Alternate gene names: 222096814

Gene position: 3106239-3105241 (Counterclockwise)

Preceding gene: 222096816

Following gene: 222096813

Centisome position: 59.57

GC content: 39.54

Gene sequence:

>999_bases
ATGAGTGAGAAAATAATGTTAACTGGGATTAAGCCGACAGGTTATCCGCATTTAGGAAATTATATTGGCGCTATAAAACC
TGCGTTGCAAATGTCAAAGAAGAATGAAGGAAAAGCATTGTACTTTATAGCTGATTATCATGCGTTAAATGCTGTGCATG
ATCCGGAGAAGTTCAGTAGTTATACGAAAGAGGTAGCAGCTACTTGGTTATCACTTGGACTTGGAGAAGATGTTATTTTT
TACAGGCAAACAGAAGTGCCGGAGATTCTAGAATTAGCTTGGATATTAGCTTGCCTAACTCCGAAAGGGCTTATGAACCG
TGCTCATGCGTATAAAGCGAAGGTGGAGCAAAATAAAGAAGCGGGTTTAGAGGTCGATGCAGGAGTGAATATGGGATTAT
ATACGTATCCAATCTTAATGGCAGCTGACATATTACTATTCCAGGCTACGCATGTGCCAGTCGGAAAAGACCAAATTCAG
CATATTGAAATTGCGCGTGATATCGCGACGTATTTTAATCATACATTCGGCATGACATTTACGCTTCCGGAGTATGTCAT
ACAAGAAGAAGGAGCAATATTACCAGGGCTTGATGGAAGAAAGATGAGTAAAAGTTACGGGAATGTGATTCCGTTATTTG
CGGAGCAAGAAAAACTAAGGAAATTAATATTTAAAATCAAAACGGATTCTTCACTTCCAAATGAACCGAAAGAACTAGAA
ACGTTATATACAATTTATAAAGAATTTGCGACAGAGGATGAAATGCAGTCGATGCGTGAAAAATATGAAACTGGCATTGG
ATGGGGCGATGTGAAAAAAGAGTTGTTTCGCGTTGTAGACCGTGAATTGGCTGGGCCTCGTGAGAAATATGCGATGTATA
TGAATGAGCCAAATTTATTATATGAAGCATTAGAAAAAGGTGCTGAGAAGGCACGGGCTATTGCGAAGGTAAATTTAGCG
GAAATTAAAAAACGGATTGGATTTGAGAGGGGGCGCTGA

Upstream 100 bases:

>100_bases
AAGTGAGCTAACAATAGCTAATTAAGGTGGTACCGCGGGAGTCTCTCGTCCTTTTTTAAGGATGAGGGGCTCTTTTTATT
TTGAGAAAGGAGGAGTTAGG

Downstream 100 bases:

>100_bases
GCGTTTCCTCTTTTTTCTCTATAACTTATTCGTCATATCGATGAGTAAAGCAAGGAGTTCGCATATTCTTTTGAAACTTA
TTAGTTGCATATATTAAAAA

Product: tryptophanyl-tRNA synthetase

Products: NA

Alternate protein names: Tryptophan--tRNA ligase; TrpRS [H]

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MSEKIMLTGIKPTGYPHLGNYIGAIKPALQMSKKNEGKALYFIADYHALNAVHDPEKFSSYTKEVAATWLSLGLGEDVIF
YRQTEVPEILELAWILACLTPKGLMNRAHAYKAKVEQNKEAGLEVDAGVNMGLYTYPILMAADILLFQATHVPVGKDQIQ
HIEIARDIATYFNHTFGMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEPKELE
TLYTIYKEFATEDEMQSMREKYETGIGWGDVKKELFRVVDRELAGPREKYAMYMNEPNLLYEALEKGAEKARAIAKVNLA
EIKKRIGFERGR

Sequences:

>Translated_332_residues
MSEKIMLTGIKPTGYPHLGNYIGAIKPALQMSKKNEGKALYFIADYHALNAVHDPEKFSSYTKEVAATWLSLGLGEDVIF
YRQTEVPEILELAWILACLTPKGLMNRAHAYKAKVEQNKEAGLEVDAGVNMGLYTYPILMAADILLFQATHVPVGKDQIQ
HIEIARDIATYFNHTFGMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEPKELE
TLYTIYKEFATEDEMQSMREKYETGIGWGDVKKELFRVVDRELAGPREKYAMYMNEPNLLYEALEKGAEKARAIAKVNLA
EIKKRIGFERGR
>Mature_331_residues
SEKIMLTGIKPTGYPHLGNYIGAIKPALQMSKKNEGKALYFIADYHALNAVHDPEKFSSYTKEVAATWLSLGLGEDVIFY
RQTEVPEILELAWILACLTPKGLMNRAHAYKAKVEQNKEAGLEVDAGVNMGLYTYPILMAADILLFQATHVPVGKDQIQH
IEIARDIATYFNHTFGMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEPKELET
LYTIYKEFATEDEMQSMREKYETGIGWGDVKKELFRVVDRELAGPREKYAMYMNEPNLLYEALEKGAEKARAIAKVNLAE
IKKRIGFERGR

Specific function: Unknown

COG id: COG0180

COG function: function code J; Tryptophanyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI7710154, Length=337, Percent_Identity=30.8605341246291, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI41352700, Length=187, Percent_Identity=38.5026737967914, Blast_Score=146, Evalue=3e-35,
Organism=Escherichia coli, GI1789786, Length=341, Percent_Identity=33.4310850439883, Blast_Score=168, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI71982800, Length=339, Percent_Identity=32.4483775811209, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI71982793, Length=339, Percent_Identity=32.4483775811209, Blast_Score=143, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6320474, Length=349, Percent_Identity=34.9570200573066, Blast_Score=167, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24666151, Length=335, Percent_Identity=31.044776119403, Blast_Score=144, Evalue=9e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002305
- InterPro:   IPR014729
- InterPro:   IPR002306 [H]

Pfam domain/function: PF00579 tRNA-synt_1b [H]

EC number: =6.1.1.2 [H]

Molecular weight: Translated: 37643; Mature: 37512

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS50237 HECT ; PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKIMLTGIKPTGYPHLGNYIGAIKPALQMSKKNEGKALYFIADYHALNAVHDPEKFSS
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCHHHHHH
YTKEVAATWLSLGLGEDVIFYRQTEVPEILELAWILACLTPKGLMNRAHAYKAKVEQNKE
HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHH
AGLEVDAGVNMGLYTYPILMAADILLFQATHVPVGKDQIQHIEIARDIATYFNHTFGMTF
CCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
TLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEPKELE
ECHHHHHHCCCCCCCCCCCCHHHHHHCCEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHH
TLYTIYKEFATEDEMQSMREKYETGIGWGDVKKELFRVVDRELAGPREKYAMYMNEPNLL
HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHEEEECCCHHH
YEALEKGAEKARAIAKVNLAEIKKRIGFERGR
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
SEKIMLTGIKPTGYPHLGNYIGAIKPALQMSKKNEGKALYFIADYHALNAVHDPEKFSS
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCHHHHHH
YTKEVAATWLSLGLGEDVIFYRQTEVPEILELAWILACLTPKGLMNRAHAYKAKVEQNKE
HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHH
AGLEVDAGVNMGLYTYPILMAADILLFQATHVPVGKDQIQHIEIARDIATYFNHTFGMTF
CCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
TLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEPKELE
ECHHHHHHCCCCCCCCCCCCHHHHHHCCEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHH
TLYTIYKEFATEDEMQSMREKYETGIGWGDVKKELFRVVDRELAGPREKYAMYMNEPNLL
HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHEEEECCCHHH
YEALEKGAEKARAIAKVNLAEIKKRIGFERGR
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]