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The map label for this gene is yfkF [H]

Identifier: 222096752

GI number: 222096752

Start: 3051698

End: 3052894

Strand: Reverse

Name: yfkF [H]

Synonym: BCQ_3092

Alternate gene names: 222096752

Gene position: 3052894-3051698 (Counterclockwise)

Preceding gene: 222096753

Following gene: 222096751

Centisome position: 58.55

GC content: 38.1

Gene sequence:

>1197_bases
ATGTCGATACGTTTTACTTTTTGGATTATGGTTGGGATTGTAGCAATTTCGGGTTTGTCACAAGGTATGCTCTTACCTGC
CATTGCAATGATTTTTGAACAAGAAGGGGTTAGTTCAAGTATTAATGGTATTCATGCGACGGCATTGTACATTGGGATAT
TAGTTATTTCGCCGTTTCTTGAAAAACCGATGCAAAGGTTTGGAATGAAGCCAATTATCGTGATTGGTGGGTTTCTCGTT
ATTATTTCATTATTCTTTTTTACACAAACATTTTCGTTTTGGGTATGGTTTATCCTTAGATTTCTAGTTGGAGTGGGAGA
TCATATGCTACATGTCGGAACACAAACATGGATTACGACAACATCGGATCCGAGTAAAATAGGTAGACAAGTATCGATAT
ACGGTGTATTCTTCGGAATTGGTTTTGCCGTCGGTCCGTATTTAGCAAGCACAGTTCAGTACGGTCTTGCAACGCCATTT
ATTATATCTACTATACTTTGTCTAATAGGTTGGCTGTTATTATTACCAACAAAAAATGCATTCCCGGCGCAAGATGAAAG
AGAAGTGAAGAGTGAATCATCATTTTCACGTTATAAACAAGTTGTTGGATTAGGATGGATTGCACTGCTGGGACCACTTG
CATATGGTGTACTGGAAGCAATGTTAAACAGTAACTTACCAGTATACGCGCTTCGAAAAGGATGGTCCGTTTCAGAAGTA
TCCTTCTTATTACCAGCATTTGCAGTTGGGGGCATTATTACACAAATTCCGCTCGGTATATTAAGTGACAAATACGGAAG
GGATCGTATTTTAACGTGGACGTTCTGCATAAGTACGGGCATTTTCTTGCTTGCAGCCGTATTTGATCAATATTACTGGA
TCGTCTTTGCCTGCATGTTGTTAGCGGGTATGGTCATTGGATCGTGCTTCTCGTTAGGACTTGGATTTATGACAGATTTA
TTACCGAGACACTTATTGCCAGCAGGTAATATATTATCTGGAATTGCCTTTAGTTTAGGAAGTATACTGGGACCTGTATT
AGGAGGCGTATTTATAGAAAAAATACAGTATACAAGCTTTTTTATTGCGGTTATGATTATAATAGGAATTCTCGCAATGT
TATATATGATCTACATGAAGAATCAATTCGCATCAAGAAAAATAGAAAGTAGGTTAGGGCATGACAAAACAACCTAA

Upstream 100 bases:

>100_bases
TCATTCTTTTAGCTTCTTTTTTATTGCGAATATTCGTACACGCATTTGTAGAAACAGTTTATAATGAAAAGTGGAAAGCG
TGAGAAGGAGAGGGAAAGGG

Downstream 100 bases:

>100_bases
TAAAAAGAAATTTGAAGTACTCGAAAACGAAACAATTACAGACTGCTTAGCACGTATGGAACAAGAAGGCTATGCACCGT
CTCGCCGCATGGAAGAGCCA

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSIRFTFWIMVGIVAISGLSQGMLLPAIAMIFEQEGVSSSINGIHATALYIGILVISPFLEKPMQRFGMKPIIVIGGFLV
IISLFFFTQTFSFWVWFILRFLVGVGDHMLHVGTQTWITTTSDPSKIGRQVSIYGVFFGIGFAVGPYLASTVQYGLATPF
IISTILCLIGWLLLLPTKNAFPAQDEREVKSESSFSRYKQVVGLGWIALLGPLAYGVLEAMLNSNLPVYALRKGWSVSEV
SFLLPAFAVGGIITQIPLGILSDKYGRDRILTWTFCISTGIFLLAAVFDQYYWIVFACMLLAGMVIGSCFSLGLGFMTDL
LPRHLLPAGNILSGIAFSLGSILGPVLGGVFIEKIQYTSFFIAVMIIIGILAMLYMIYMKNQFASRKIESRLGHDKTT

Sequences:

>Translated_398_residues
MSIRFTFWIMVGIVAISGLSQGMLLPAIAMIFEQEGVSSSINGIHATALYIGILVISPFLEKPMQRFGMKPIIVIGGFLV
IISLFFFTQTFSFWVWFILRFLVGVGDHMLHVGTQTWITTTSDPSKIGRQVSIYGVFFGIGFAVGPYLASTVQYGLATPF
IISTILCLIGWLLLLPTKNAFPAQDEREVKSESSFSRYKQVVGLGWIALLGPLAYGVLEAMLNSNLPVYALRKGWSVSEV
SFLLPAFAVGGIITQIPLGILSDKYGRDRILTWTFCISTGIFLLAAVFDQYYWIVFACMLLAGMVIGSCFSLGLGFMTDL
LPRHLLPAGNILSGIAFSLGSILGPVLGGVFIEKIQYTSFFIAVMIIIGILAMLYMIYMKNQFASRKIESRLGHDKTT
>Mature_397_residues
SIRFTFWIMVGIVAISGLSQGMLLPAIAMIFEQEGVSSSINGIHATALYIGILVISPFLEKPMQRFGMKPIIVIGGFLVI
ISLFFFTQTFSFWVWFILRFLVGVGDHMLHVGTQTWITTTSDPSKIGRQVSIYGVFFGIGFAVGPYLASTVQYGLATPFI
ISTILCLIGWLLLLPTKNAFPAQDEREVKSESSFSRYKQVVGLGWIALLGPLAYGVLEAMLNSNLPVYALRKGWSVSEVS
FLLPAFAVGGIITQIPLGILSDKYGRDRILTWTFCISTGIFLLAAVFDQYYWIVFACMLLAGMVIGSCFSLGLGFMTDLL
PRHLLPAGNILSGIAFSLGSILGPVLGGVFIEKIQYTSFFIAVMIIIGILAMLYMIYMKNQFASRKIESRLGHDKTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787126, Length=338, Percent_Identity=23.3727810650888, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43785; Mature: 43654

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRFTFWIMVGIVAISGLSQGMLLPAIAMIFEQEGVSSSINGIHATALYIGILVISPFL
CCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHH
EKPMQRFGMKPIIVIGGFLVIISLFFFTQTFSFWVWFILRFLVGVGDHMLHVGTQTWITT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEE
TSDPSKIGRQVSIYGVFFGIGFAVGPYLASTVQYGLATPFIISTILCLIGWLLLLPTKNA
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
FPAQDEREVKSESSFSRYKQVVGLGWIALLGPLAYGVLEAMLNSNLPVYALRKGWSVSEV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHH
SFLLPAFAVGGIITQIPLGILSDKYGRDRILTWTFCISTGIFLLAAVFDQYYWIVFACML
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMVIGSCFSLGLGFMTDLLPRHLLPAGNILSGIAFSLGSILGPVLGGVFIEKIQYTSF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIAVMIIIGILAMLYMIYMKNQFASRKIESRLGHDKTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIRFTFWIMVGIVAISGLSQGMLLPAIAMIFEQEGVSSSINGIHATALYIGILVISPFL
CEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHH
EKPMQRFGMKPIIVIGGFLVIISLFFFTQTFSFWVWFILRFLVGVGDHMLHVGTQTWITT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEE
TSDPSKIGRQVSIYGVFFGIGFAVGPYLASTVQYGLATPFIISTILCLIGWLLLLPTKNA
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
FPAQDEREVKSESSFSRYKQVVGLGWIALLGPLAYGVLEAMLNSNLPVYALRKGWSVSEV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHH
SFLLPAFAVGGIITQIPLGILSDKYGRDRILTWTFCISTGIFLLAAVFDQYYWIVFACML
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMVIGSCFSLGLGFMTDLLPRHLLPAGNILSGIAFSLGSILGPVLGGVFIEKIQYTSF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIAVMIIIGILAMLYMIYMKNQFASRKIESRLGHDKTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]