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The map label for this gene is yvbY [H]

Identifier: 222096725

GI number: 222096725

Start: 3022979

End: 3023671

Strand: Reverse

Name: yvbY [H]

Synonym: BCQ_3065

Alternate gene names: 222096725

Gene position: 3023671-3022979 (Counterclockwise)

Preceding gene: 222096726

Following gene: 222096724

Centisome position: 57.99

GC content: 38.96

Gene sequence:

>693_bases
ATGAATACGGATGTACAAGAGTCTTTTTTAAACAATATCGCACGTAAATTAAATCGAGAACGTCGCTCGGGAGTTACTCC
TCCCAGGTGGAAAAACAATCCACTTAGCCACTTTTCTAATGAGATAGATCACAAAAGTTTAATAGAGCAGTTTATTGCAA
ACTTGCATACGTTACATACAGAAGTAAGTCATATACACCGTTCAGAAATAGGGAGTGCACTTCAGTATGTTGTACATAAA
TTTAATGTTCAATCTGCGGTGTATTGGGATGATGATAGATTACATCAACTTGAAATAGGAAAGCATTTAACAGGAAATTT
CGTTTCTCATCGAATTTGGCAAAGGAAAGAAGGGGAGAGAGAACTACGGGATTATGCAGCTCAAGTTGATATGGGAATTA
CATATGCTGAAATGGGACTCGCTGAGACGGGAACAGTTGTTTTATGGAATGGTGGTGGACGGGGGCGTTTAGTTAGCGTT
TTGCCAGCAGTTTATGTAGCAATTCTCTCAGAACATACAATTTATAGACGCTTAACAGAAGGAGTAACTAGAATTCATGA
ACAGGTTTCGAATGGATTACCTGCCTGTATTAATTTTATCACTGGGCCTAGCCGGACAGGTGATATTGAGATGGAATTAG
CTTTTGGAGTTCATGGCCCCGGTAAAGTCCATGTCATTCTATTAAAGAATTAG

Upstream 100 bases:

>100_bases
CCAGGTCCATTAAAAGGATGGACAGAAAGTAGAGATTTTCCAAAACCTGCGAAACAATCATTCCGTGATTGGTGGAAAAA
AGAAACGAGGGATTCATAAT

Downstream 100 bases:

>100_bases
AAAGAAAAACAAAAGAATGCGAGGGGGAGTGGGAATTTTGATGAAGAATAAATTTCGTTATTATGTCTTTACAATGCTCA
CGTTTATTACGATGGTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNTDVQESFLNNIARKLNRERRSGVTPPRWKNNPLSHFSNEIDHKSLIEQFIANLHTLHTEVSHIHRSEIGSALQYVVHK
FNVQSAVYWDDDRLHQLEIGKHLTGNFVSHRIWQRKEGERELRDYAAQVDMGITYAEMGLAETGTVVLWNGGGRGRLVSV
LPAVYVAILSEHTIYRRLTEGVTRIHEQVSNGLPACINFITGPSRTGDIEMELAFGVHGPGKVHVILLKN

Sequences:

>Translated_230_residues
MNTDVQESFLNNIARKLNRERRSGVTPPRWKNNPLSHFSNEIDHKSLIEQFIANLHTLHTEVSHIHRSEIGSALQYVVHK
FNVQSAVYWDDDRLHQLEIGKHLTGNFVSHRIWQRKEGERELRDYAAQVDMGITYAEMGLAETGTVVLWNGGGRGRLVSV
LPAVYVAILSEHTIYRRLTEGVTRIHEQVSNGLPACINFITGPSRTGDIEMELAFGVHGPGKVHVILLKN
>Mature_230_residues
MNTDVQESFLNNIARKLNRERRSGVTPPRWKNNPLSHFSNEIDHKSLIEQFIANLHTLHTEVSHIHRSEIGSALQYVVHK
FNVQSAVYWDDDRLHQLEIGKHLTGNFVSHRIWQRKEGERELRDYAAQVDMGITYAEMGLAETGTVVLWNGGGRGRLVSV
LPAVYVAILSEHTIYRRLTEGVTRIHEQVSNGLPACINFITGPSRTGDIEMELAFGVHGPGKVHVILLKN

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]

COG id: COG1556

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutC/ykgG family [H]

Homologues:

Organism=Escherichia coli, GI87081718, Length=229, Percent_Identity=31.4410480349345, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003741
- InterPro:   IPR002698
- InterPro:   IPR022823 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 26059; Mature: 26059

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTDVQESFLNNIARKLNRERRSGVTPPRWKNNPLSHFSNEIDHKSLIEQFIANLHTLHT
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
EVSHIHRSEIGSALQYVVHKFNVQSAVYWDDDRLHQLEIGKHLTGNFVSHRIWQRKEGER
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHCCHHH
ELRDYAAQVDMGITYAEMGLAETGTVVLWNGGGRGRLVSVLPAVYVAILSEHTIYRRLTE
HHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GVTRIHEQVSNGLPACINFITGPSRTGDIEMELAFGVHGPGKVHVILLKN
HHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MNTDVQESFLNNIARKLNRERRSGVTPPRWKNNPLSHFSNEIDHKSLIEQFIANLHTLHT
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
EVSHIHRSEIGSALQYVVHKFNVQSAVYWDDDRLHQLEIGKHLTGNFVSHRIWQRKEGER
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHCCHHH
ELRDYAAQVDMGITYAEMGLAETGTVVLWNGGGRGRLVSVLPAVYVAILSEHTIYRRLTE
HHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GVTRIHEQVSNGLPACINFITGPSRTGDIEMELAFGVHGPGKVHVILLKN
HHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA