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The map label for this gene is yulC [H]

Identifier: 222096658

GI number: 222096658

Start: 2947025

End: 2948518

Strand: Reverse

Name: yulC [H]

Synonym: BCQ_2998

Alternate gene names: 222096658

Gene position: 2948518-2947025 (Counterclockwise)

Preceding gene: 222096659

Following gene: 222096657

Centisome position: 56.55

GC content: 40.09

Gene sequence:

>1494_bases
ATGGAAAAAGTTTGGGCTTTTGATTTAGGTGCATCTAATGGGCGTTTAATGGTAAGTGGATTTGATGGGAAACGCCTTTA
TCTGGAAGAAGTTCACCGGTTCTCCAATCGCCCTATTTACGCAACAGGTCATTATTATTGGGATATTTTAAGGATCTTCC
AAGAAATGAAGAATGGAATAGGGAAAAGTATTCGAAACGGTCATAAGTCGATCGAAAGTTTATCTATCGATACGTGGGGC
GTTGATTTCGGACTTCTTTCTGCAACAGGGGAATTGCTTAGCAATCCTTATTCTTATAGAGATCCGCATACAAATGATAG
CTTAAAAGAAATTACGGAAGTCATTCCGAGGGATGTTTTGTTCTCTCGAACGGGAGTCACGCCAGCAGCAATTAATACGA
TTTGCCAGCTTCATGCTATAAAAAAGCATAACCAAAATTTAATGGAAAAGGCAAAAACGCTATTATTAACGCCAAACTTG
CTGAGCTATTTATTTTCAGGTGTAAAGGCGAATGAATATACGATTAGTACAACGACATCGTTATTTAACATTCACGAGCG
TAATTGGGATAATGCCCTCATGACAAAGTTGAGCTTGCCTACAGAAATGATGGCACATATTGTAATGCCAGGAACAACTC
TCGGACCGACGCTTCCTTCCATTCATAACGAATTTGGCATGAAGCCTGTTAAAGTTATTGCTGGTACAGGGCATGATACA
GCCTGCGCTCTTGCCGCATTACCTATAAAGTCTGAATATTCTGTTTTTATGAGTTGTGGTACATGGATTTTAATGGGAAT
CCAAGTAAAGGATCCAGTAATAAATGAACAGGCTTTGGAATGGGGCTTTACAAATGAAGGAACGGCAGATGGCGAGTTTC
GGCTACTTAAAAATATTATGGGATTATGGCTCATTCAAGAATGTAGGGGGACTTGGGCAAAAGAAGGCAAGCTTTTTACT
TACGAAGAAGAAGCAGCGTTCATTCGAAATACAAAACCATTTGCACATTTCATAGACCCAGATGATCCTTCTTTCTTCAA
TCCGGAAAATATGCCAAAACAAATCCTTGATTTCTGTATAAAGAGCGGTCAACAGCCGCCTGAAACGGAAGGAAGTTTCC
TCCGCTGTATTTTGGAGAGTCTTTCATTCAAGTACAGATGGGTGTTAGAGAAGCTGGAAGTGTTAACTGGAAAGTCAATA
GAAGTTATCCACATGGGCGGCGGTGGTATTCAAAATGATCTGTTTTGTCAATTTACCGCAAATGCGACTAACCGCCCTGT
TGTAGCGGGGCCGGTTGAAGCGAGTGCAATTGGAAATGCATTATCGCAATGGATTGCGCTAGGAAAAATAAAGGATTTAA
AGGAAGGTAGAGAGGTTGTTGAAAACTCGTTTCCTGTTAAACATTATCAACCTCAAAATCAATTAGAATGGCAAGAAGCA
TACGGCCGTTTTCTTGAAATAATCGATAACAATGTAGTAAGAAGGGAGCTTTAA

Upstream 100 bases:

>100_bases
GAAGAATGTCACGAATTAAGAAATCTATCTTCTGAGAAATATAGATTACAACTACTAAAAGATGGGGAGTAATTGAAGTG
TTTCCGAGGGGTGTGAAGGA

Downstream 100 bases:

>100_bases
AATGAAAACAGTTCATAATAGATTTTATAATACATTACCGAAAATTGGAATTAGGCCAACGATTGATGGCAGAAGAAATG
GTGTACGTGAATCTCTTGAA

Product: yulc

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MEKVWAFDLGASNGRLMVSGFDGKRLYLEEVHRFSNRPIYATGHYYWDILRIFQEMKNGIGKSIRNGHKSIESLSIDTWG
VDFGLLSATGELLSNPYSYRDPHTNDSLKEITEVIPRDVLFSRTGVTPAAINTICQLHAIKKHNQNLMEKAKTLLLTPNL
LSYLFSGVKANEYTISTTTSLFNIHERNWDNALMTKLSLPTEMMAHIVMPGTTLGPTLPSIHNEFGMKPVKVIAGTGHDT
ACALAALPIKSEYSVFMSCGTWILMGIQVKDPVINEQALEWGFTNEGTADGEFRLLKNIMGLWLIQECRGTWAKEGKLFT
YEEEAAFIRNTKPFAHFIDPDDPSFFNPENMPKQILDFCIKSGQQPPETEGSFLRCILESLSFKYRWVLEKLEVLTGKSI
EVIHMGGGGIQNDLFCQFTANATNRPVVAGPVEASAIGNALSQWIALGKIKDLKEGREVVENSFPVKHYQPQNQLEWQEA
YGRFLEIIDNNVVRREL

Sequences:

>Translated_497_residues
MEKVWAFDLGASNGRLMVSGFDGKRLYLEEVHRFSNRPIYATGHYYWDILRIFQEMKNGIGKSIRNGHKSIESLSIDTWG
VDFGLLSATGELLSNPYSYRDPHTNDSLKEITEVIPRDVLFSRTGVTPAAINTICQLHAIKKHNQNLMEKAKTLLLTPNL
LSYLFSGVKANEYTISTTTSLFNIHERNWDNALMTKLSLPTEMMAHIVMPGTTLGPTLPSIHNEFGMKPVKVIAGTGHDT
ACALAALPIKSEYSVFMSCGTWILMGIQVKDPVINEQALEWGFTNEGTADGEFRLLKNIMGLWLIQECRGTWAKEGKLFT
YEEEAAFIRNTKPFAHFIDPDDPSFFNPENMPKQILDFCIKSGQQPPETEGSFLRCILESLSFKYRWVLEKLEVLTGKSI
EVIHMGGGGIQNDLFCQFTANATNRPVVAGPVEASAIGNALSQWIALGKIKDLKEGREVVENSFPVKHYQPQNQLEWQEA
YGRFLEIIDNNVVRREL
>Mature_497_residues
MEKVWAFDLGASNGRLMVSGFDGKRLYLEEVHRFSNRPIYATGHYYWDILRIFQEMKNGIGKSIRNGHKSIESLSIDTWG
VDFGLLSATGELLSNPYSYRDPHTNDSLKEITEVIPRDVLFSRTGVTPAAINTICQLHAIKKHNQNLMEKAKTLLLTPNL
LSYLFSGVKANEYTISTTTSLFNIHERNWDNALMTKLSLPTEMMAHIVMPGTTLGPTLPSIHNEFGMKPVKVIAGTGHDT
ACALAALPIKSEYSVFMSCGTWILMGIQVKDPVINEQALEWGFTNEGTADGEFRLLKNIMGLWLIQECRGTWAKEGKLFT
YEEEAAFIRNTKPFAHFIDPDDPSFFNPENMPKQILDFCIKSGQQPPETEGSFLRCILESLSFKYRWVLEKLEVLTGKSI
EVIHMGGGGIQNDLFCQFTANATNRPVVAGPVEASAIGNALSQWIALGKIKDLKEGREVVENSFPVKHYQPQNQLEWQEA
YGRFLEIIDNNVVRREL

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=471, Percent_Identity=35.031847133758, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1789168, Length=490, Percent_Identity=25.3061224489796, Blast_Score=108, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 55977; Mature: 55977

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVWAFDLGASNGRLMVSGFDGKRLYLEEVHRFSNRPIYATGHYYWDILRIFQEMKNGI
CCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHH
GKSIRNGHKSIESLSIDTWGVDFGLLSATGELLSNPYSYRDPHTNDSLKEITEVIPRDVL
HHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHH
FSRTGVTPAAINTICQLHAIKKHNQNLMEKAKTLLLTPNLLSYLFSGVKANEYTISTTTS
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHCCCCCCCEEEEEHHH
LFNIHERNWDNALMTKLSLPTEMMAHIVMPGTTLGPTLPSIHNEFGMKPVKVIAGTGHDT
HHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCH
ACALAALPIKSEYSVFMSCGTWILMGIQVKDPVINEQALEWGFTNEGTADGEFRLLKNIM
HHHHEECCCCCCHHHHHCCCCEEEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHH
GLWLIQECRGTWAKEGKLFTYEEEAAFIRNTKPFAHFIDPDDPSFFNPENMPKQILDFCI
HHHHHHHHHCCHHCCCCEEEEEHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHH
KSGQQPPETEGSFLRCILESLSFKYRWVLEKLEVLTGKSIEVIHMGGGGIQNDLFCQFTA
HCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEC
NATNRPVVAGPVEASAIGNALSQWIALGKIKDLKEGREVVENSFPVKHYQPQNQLEWQEA
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
YGRFLEIIDNNVVRREL
HHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MEKVWAFDLGASNGRLMVSGFDGKRLYLEEVHRFSNRPIYATGHYYWDILRIFQEMKNGI
CCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHH
GKSIRNGHKSIESLSIDTWGVDFGLLSATGELLSNPYSYRDPHTNDSLKEITEVIPRDVL
HHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHH
FSRTGVTPAAINTICQLHAIKKHNQNLMEKAKTLLLTPNLLSYLFSGVKANEYTISTTTS
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHCCCCCCCEEEEEHHH
LFNIHERNWDNALMTKLSLPTEMMAHIVMPGTTLGPTLPSIHNEFGMKPVKVIAGTGHDT
HHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCH
ACALAALPIKSEYSVFMSCGTWILMGIQVKDPVINEQALEWGFTNEGTADGEFRLLKNIM
HHHHEECCCCCCHHHHHCCCCEEEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHH
GLWLIQECRGTWAKEGKLFTYEEEAAFIRNTKPFAHFIDPDDPSFFNPENMPKQILDFCI
HHHHHHHHHCCHHCCCCEEEEEHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHH
KSGQQPPETEGSFLRCILESLSFKYRWVLEKLEVLTGKSIEVIHMGGGGIQNDLFCQFTA
HCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEC
NATNRPVVAGPVEASAIGNALSQWIALGKIKDLKEGREVVENSFPVKHYQPQNQLEWQEA
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
YGRFLEIIDNNVVRREL
HHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]