Click here to switch to the map view.

The map label for this gene is gerAA [H]

Identifier: 222096612

GI number: 222096612

Start: 2884474

End: 2886039

Strand: Reverse

Name: gerAA [H]

Synonym: BCQ_2952

Alternate gene names: 222096612

Gene position: 2886039-2884474 (Counterclockwise)

Preceding gene: 222096614

Following gene: 222096611

Centisome position: 55.35

GC content: 36.08

Gene sequence:

>1566_bases
GTGGAAGTCAAGAGACAAACAAGTGAAAAAAATAATATTCAAAGTAAAACGAAACAAGAGTATAAACCTTCTCAAAATAC
AATCGTTCATTTCACAAATGATTTTGCCTCTAACTTAGAACTTATAAAGCAACAAATCGGACATAATTCTGATGTTCGCT
TTCGGAAGTTTAATATTGGGCGCACAGATATTCAGGCTGGTATCGTTTTTGTTGATGGTCTATCAGATAAAGAGATAATT
GACAAACATATTATGAAATTACTAATGGATGATTTTTCTGATGAATATAAAAATGAATCTTCTTATGTGGAGCGGACTGT
TTCAAAAGAATATATTAAAAATAAAGTTCTTACAATTAGTGAAGTAGCAGAAGTCCATTACATAAAAGATTTAATACCCA
AAGTATTGATAGGTTCAACAGCTCTTTTAATTGATGGTTTAGCAGATGTGTTTATTCTTGGTACAACAAAAGCAAATAAA
CGAAACATTGAAGAACCAGTATCGGAGGCATTAGTCAGAGGACCACGGGTCGGTTTTACTGAAGTATTAAGTGATAATAC
CTCACTTTTGCGACGACATTGTGCGGATGAGAGCTTATCATTAGTAAAGCTACCAGTAGGAGAACGTGCAAAGAAAGAGT
TAGTTGTCGCATTTATTAACGATCTTGCTAGTACAGAATTGGTGGATGAAATAAAAAACAGAATTCAGAAAATTGACATA
GACAGTGTACTCGAATCTGGTTATATAGAGCAACTCATTGAAGATAATTATCTAAGTCCTTTTCCGCAGATTCAAAATAC
AGAACGACCTGATCGTGTTATTAGTGCTTTGATGGAAGGTCGAGTAGCTATTTTGTTAGATGGAACACCATTTGTTTTAA
TTGCTCCAGTTACATTTAGTATGCTGCTGCAATCACCAGAAGATTATTATGAAAGGTGGCTTCCTGGTACACTTCTCCGC
TTATTACGCTTCATGACAGCTTTTGTTTCATTATTTGCTCCAGCACTGTATATTTCTTTCATTTCATTTCATCCAGGATT
AATTCCCACTAAGCTCGCTATTTCTATTATCGGATCGCGAGAAGGAGTTCCTTTTCCCGCTTTAATAGAAGCGTTAATTA
TGGAAATAGCTATCGAAGTTTTACGAGAAGCAGGTTTACGTCTGCCTAAACCGATTGGACCGGCAATGGGAATTGTGGGC
GGTTTAATAATTGGTCAGGCTGCCGTAGAAGCAGGAATTGTTAGTCCAATAATGGTTATCGTTGTTGCGGTAACAGCTAT
TTCTTCTTTTACTATTCCGCAATATAGTGTGGGAATTACGTTACGCATTCTTCGTTTTGTAGCTATGTTTTGTGCTGCGA
TATTTGGCTTGTATGGAGTTATTCTCTTCTTTCTTTTACTTTGCAGTCATTTAGTGAAACTGAAAAGTTTTGGCGTTCCT
TATACCAGCCCTGCTGTTCCATATCGATTCAGTGACTGGAAAGATTTTATGGTTCGCATGCCATTAAAAATAATGAGACG
TCGACCGAAAATAATGCATACCAAAAAAACTATCCGCAAAAGGTAG

Upstream 100 bases:

>100_bases
GTCTTTGTACAAGCTTTTATCTTGTTTTTAATTCCGTATACTATCTCAAGATTTTTTCATTGGGTTCGTATGTCAGAGAA
AGAGTGGGAAGAATGAGTTG

Downstream 100 bases:

>100_bases
CTGATGACGAAAGGAAGTGACCTTCAGTGATTACTATACCTAAAGACCGAATAACAACTTCACAAGCAGTTGTTATTATT
GTAAATTACATACTTGGGAC

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MEVKRQTSEKNNIQSKTKQEYKPSQNTIVHFTNDFASNLELIKQQIGHNSDVRFRKFNIGRTDIQAGIVFVDGLSDKEII
DKHIMKLLMDDFSDEYKNESSYVERTVSKEYIKNKVLTISEVAEVHYIKDLIPKVLIGSTALLIDGLADVFILGTTKANK
RNIEEPVSEALVRGPRVGFTEVLSDNTSLLRRHCADESLSLVKLPVGERAKKELVVAFINDLASTELVDEIKNRIQKIDI
DSVLESGYIEQLIEDNYLSPFPQIQNTERPDRVISALMEGRVAILLDGTPFVLIAPVTFSMLLQSPEDYYERWLPGTLLR
LLRFMTAFVSLFAPALYISFISFHPGLIPTKLAISIIGSREGVPFPALIEALIMEIAIEVLREAGLRLPKPIGPAMGIVG
GLIIGQAAVEAGIVSPIMVIVVAVTAISSFTIPQYSVGITLRILRFVAMFCAAIFGLYGVILFFLLLCSHLVKLKSFGVP
YTSPAVPYRFSDWKDFMVRMPLKIMRRRPKIMHTKKTIRKR

Sequences:

>Translated_521_residues
MEVKRQTSEKNNIQSKTKQEYKPSQNTIVHFTNDFASNLELIKQQIGHNSDVRFRKFNIGRTDIQAGIVFVDGLSDKEII
DKHIMKLLMDDFSDEYKNESSYVERTVSKEYIKNKVLTISEVAEVHYIKDLIPKVLIGSTALLIDGLADVFILGTTKANK
RNIEEPVSEALVRGPRVGFTEVLSDNTSLLRRHCADESLSLVKLPVGERAKKELVVAFINDLASTELVDEIKNRIQKIDI
DSVLESGYIEQLIEDNYLSPFPQIQNTERPDRVISALMEGRVAILLDGTPFVLIAPVTFSMLLQSPEDYYERWLPGTLLR
LLRFMTAFVSLFAPALYISFISFHPGLIPTKLAISIIGSREGVPFPALIEALIMEIAIEVLREAGLRLPKPIGPAMGIVG
GLIIGQAAVEAGIVSPIMVIVVAVTAISSFTIPQYSVGITLRILRFVAMFCAAIFGLYGVILFFLLLCSHLVKLKSFGVP
YTSPAVPYRFSDWKDFMVRMPLKIMRRRPKIMHTKKTIRKR
>Mature_521_residues
MEVKRQTSEKNNIQSKTKQEYKPSQNTIVHFTNDFASNLELIKQQIGHNSDVRFRKFNIGRTDIQAGIVFVDGLSDKEII
DKHIMKLLMDDFSDEYKNESSYVERTVSKEYIKNKVLTISEVAEVHYIKDLIPKVLIGSTALLIDGLADVFILGTTKANK
RNIEEPVSEALVRGPRVGFTEVLSDNTSLLRRHCADESLSLVKLPVGERAKKELVVAFINDLASTELVDEIKNRIQKIDI
DSVLESGYIEQLIEDNYLSPFPQIQNTERPDRVISALMEGRVAILLDGTPFVLIAPVTFSMLLQSPEDYYERWLPGTLLR
LLRFMTAFVSLFAPALYISFISFHPGLIPTKLAISIIGSREGVPFPALIEALIMEIAIEVLREAGLRLPKPIGPAMGIVG
GLIIGQAAVEAGIVSPIMVIVVAVTAISSFTIPQYSVGITLRILRFVAMFCAAIFGLYGVILFFLLLCSHLVKLKSFGVP
YTSPAVPYRFSDWKDFMVRMPLKIMRRRPKIMHTKKTIRKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 58518; Mature: 58518

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVKRQTSEKNNIQSKTKQEYKPSQNTIVHFTNDFASNLELIKQQIGHNSDVRFRKFNIG
CCCCHHCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCC
RTDIQAGIVFVDGLSDKEIIDKHIMKLLMDDFSDEYKNESSYVERTVSKEYIKNKVLTIS
HHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHH
EVAEVHYIKDLIPKVLIGSTALLIDGLADVFILGTTKANKRNIEEPVSEALVRGPRVGFT
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCHH
EVLSDNTSLLRRHCADESLSLVKLPVGERAKKELVVAFINDLASTELVDEIKNRIQKIDI
HHHCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DSVLESGYIEQLIEDNYLSPFPQIQNTERPDRVISALMEGRVAILLDGTPFVLIAPVTFS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEHHHHHH
MLLQSPEDYYERWLPGTLLRLLRFMTAFVSLFAPALYISFISFHPGLIPTKLAISIIGSR
HHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
EGVPFPALIEALIMEIAIEVLREAGLRLPKPIGPAMGIVGGLIIGQAAVEAGIVSPIMVI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVAVTAISSFTIPQYSVGITLRILRFVAMFCAAIFGLYGVILFFLLLCSHLVKLKSFGVP
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YTSPAVPYRFSDWKDFMVRMPLKIMRRRPKIMHTKKTIRKR
CCCCCCCCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MEVKRQTSEKNNIQSKTKQEYKPSQNTIVHFTNDFASNLELIKQQIGHNSDVRFRKFNIG
CCCCHHCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCC
RTDIQAGIVFVDGLSDKEIIDKHIMKLLMDDFSDEYKNESSYVERTVSKEYIKNKVLTIS
HHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHH
EVAEVHYIKDLIPKVLIGSTALLIDGLADVFILGTTKANKRNIEEPVSEALVRGPRVGFT
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCHH
EVLSDNTSLLRRHCADESLSLVKLPVGERAKKELVVAFINDLASTELVDEIKNRIQKIDI
HHHCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DSVLESGYIEQLIEDNYLSPFPQIQNTERPDRVISALMEGRVAILLDGTPFVLIAPVTFS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEHHHHHH
MLLQSPEDYYERWLPGTLLRLLRFMTAFVSLFAPALYISFISFHPGLIPTKLAISIIGSR
HHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
EGVPFPALIEALIMEIAIEVLREAGLRLPKPIGPAMGIVGGLIIGQAAVEAGIVSPIMVI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVAVTAISSFTIPQYSVGITLRILRFVAMFCAAIFGLYGVILFFLLLCSHLVKLKSFGVP
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YTSPAVPYRFSDWKDFMVRMPLKIMRRRPKIMHTKKTIRKR
CCCCCCCCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]