Click here to switch to the map view.

The map label for this gene is agrA [H]

Identifier: 222096485

GI number: 222096485

Start: 2764217

End: 2764951

Strand: Reverse

Name: agrA [H]

Synonym: BCQ_2825

Alternate gene names: 222096485

Gene position: 2764951-2764217 (Counterclockwise)

Preceding gene: 222096486

Following gene: 222096484

Centisome position: 53.03

GC content: 34.83

Gene sequence:

>735_bases
ATGAGTATTTTCATTTTAGAAGACGATGTCATACAAGCACAGCAAATGAAGCGGCTAGTTGAAGAGATTTGTGAGAAGTA
TAGGTTGCCTTTTGATTTTATTGAGGTGACTAGTAAAAGTGAAAATATTATTACTAATATTCCGAAGGCGAAGTATGTCC
CAATCTATTTTTTAGATATAGAGATTAAAAGGGAAGAGCGTAAAGGGTTACAAGTAGCACAAGAGATACGAAAGTATGAT
ACGCAAGGAATTATTGTTTTTGTAACGACGCATTCTGAATTTGCACCTATTTCATATCAATACATGGTATCAGCTTTAAC
TTTTATTGATAAAGGGTTGCCATACGAGGAGAGATATAAAGTTTTTGAACAATGTTTACTTCAATATGAAGCAAGAAATA
AGCATATTATTCCGTCGGATGACTTTATCGTTGCAAATAGTAATGCCACTGTGCGGGTTCCTTTTCATGAAGTTGAATAT
GTTATGACTGATGAACCGCACCGGTTAGCATTAGTGACGTTAGATCGAATCGTTTATTTTTATGGAGCATTAAAGGAGAT
AGAAATAATAGATGAACGTTTATTTCGTTGCCATCAGTCATATATCGTGAATACGAAGCAAATGTCTTCTTACGATGCGA
AACAAAAAATGATAGTTTTAAAAAGCGGGAAACGCATTCCAGTGTCACGGCGTTTAGTGAGTAAAGTACGTAACATGTTA
AAGGGTGAGATGTAA

Upstream 100 bases:

>100_bases
ATTATTTCAATTAATGAGAAGGAGAATATTATTATAATTTGAATTATATATTTATAGATAAATCTATAGATGAAAAGATT
CCAATAAAGCGAGTGATTAC

Downstream 100 bases:

>100_bases
TGTATATTTATGATTTATTTGCAATACTGCTTACTAGTATGTGTCATACGTTTTTATATATACAATTAATCCGATACAAC
AGATTGTCAGTTAGAATGTT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSIFILEDDVIQAQQMKRLVEEICEKYRLPFDFIEVTSKSENIITNIPKAKYVPIYFLDIEIKREERKGLQVAQEIRKYD
TQGIIVFVTTHSEFAPISYQYMVSALTFIDKGLPYEERYKVFEQCLLQYEARNKHIIPSDDFIVANSNATVRVPFHEVEY
VMTDEPHRLALVTLDRIVYFYGALKEIEIIDERLFRCHQSYIVNTKQMSSYDAKQKMIVLKSGKRIPVSRRLVSKVRNML
KGEM

Sequences:

>Translated_244_residues
MSIFILEDDVIQAQQMKRLVEEICEKYRLPFDFIEVTSKSENIITNIPKAKYVPIYFLDIEIKREERKGLQVAQEIRKYD
TQGIIVFVTTHSEFAPISYQYMVSALTFIDKGLPYEERYKVFEQCLLQYEARNKHIIPSDDFIVANSNATVRVPFHEVEY
VMTDEPHRLALVTLDRIVYFYGALKEIEIIDERLFRCHQSYIVNTKQMSSYDAKQKMIVLKSGKRIPVSRRLVSKVRNML
KGEM
>Mature_243_residues
SIFILEDDVIQAQQMKRLVEEICEKYRLPFDFIEVTSKSENIITNIPKAKYVPIYFLDIEIKREERKGLQVAQEIRKYDT
QGIIVFVTTHSEFAPISYQYMVSALTFIDKGLPYEERYKVFEQCLLQYEARNKHIIPSDDFIVANSNATVRVPFHEVEYV
MTDEPHRLALVTLDRIVYFYGALKEIEIIDERLFRCHQSYIVNTKQMSSYDAKQKMIVLKSGKRIPVSRRLVSKVRNMLK
GEM

Specific function: Required for high-level post-exponential phase expression of a series of secreted proteins [H]

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28782; Mature: 28651

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFILEDDVIQAQQMKRLVEEICEKYRLPFDFIEVTSKSENIITNIPKAKYVPIYFLDI
CEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEECCCCCCEEEEEEEEE
EIKREERKGLQVAQEIRKYDTQGIIVFVTTHSEFAPISYQYMVSALTFIDKGLPYEERYK
EEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
VFEQCLLQYEARNKHIIPSDDFIVANSNATVRVPFHEVEYVMTDEPHRLALVTLDRIVYF
HHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECHHHEEEEECCCCCEEEEHHHHHHHHH
YGALKEIEIIDERLFRCHQSYIVNTKQMSSYDAKQKMIVLKSGKRIPVSRRLVSKVRNML
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHEEEEEECCCCCCHHHHHHHHHHHHH
KGEM
CCCC
>Mature Secondary Structure 
SIFILEDDVIQAQQMKRLVEEICEKYRLPFDFIEVTSKSENIITNIPKAKYVPIYFLDI
EEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEECCCCCCEEEEEEEEE
EIKREERKGLQVAQEIRKYDTQGIIVFVTTHSEFAPISYQYMVSALTFIDKGLPYEERYK
EEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
VFEQCLLQYEARNKHIIPSDDFIVANSNATVRVPFHEVEYVMTDEPHRLALVTLDRIVYF
HHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECHHHEEEEECCCCCEEEEHHHHHHHHH
YGALKEIEIIDERLFRCHQSYIVNTKQMSSYDAKQKMIVLKSGKRIPVSRRLVSKVRNML
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHEEEEEECCCCCCHHHHHHHHHHHHH
KGEM
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA