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The map label for this gene is yabE [H]

Identifier: 222096452

GI number: 222096452

Start: 2725618

End: 2727228

Strand: Reverse

Name: yabE [H]

Synonym: BCQ_2792

Alternate gene names: 222096452

Gene position: 2727228-2725618 (Counterclockwise)

Preceding gene: 222096454

Following gene: 222096451

Centisome position: 52.3

GC content: 39.54

Gene sequence:

>1611_bases
ATGAAAAAAGTAATTGGCGCAGCAACAGCAACTGTTTTCGGATTGGGAGCATTTACTACAACTGCTACTGCAGAAACGAT
CGTAACAGCAGATGTACTCAACGTACGTGAAAAACCGACTACAGAATCAAAAGTGGTCGAAAAAGTAAAAAACGGGGAAG
AGTTAAAAGTCATCAATACCGAAGATGGCTGGTCAAAAATTGAGTTAAATGGTAAAGAAGTATTTGTAAGCTCGGAGTTT
ACTAAAGATATTTACCATGTAACAGCAGATTTGTTAAATGTACGTTCTGAATCAAACACAGAATCAAAAATTCTTGGCAG
ACTGAAAAAAGATGATGTAATTGAATCAACGAAGCAAGTAAAAGACGGATGGCTACAATTTGAGTATAAGGGAAAAACAG
CTTATGTAAATGTTTCTTTCTTATCAAGTAAAGCACCAATTGAAAAAAAGGCTGACGAGAAAACGAAGCAAGTAGCGAAA
GTACAAAAATCGGTGAAAGCTAAGGAAGAAGCTAAAACACAGAAGATAACAAAGGCAAAAGAAACAATAAAACCTAAGGA
AGAAGTGAAAGTGCAAGAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTGCAAGAAGTAGCGAAACCTAAGGAAGAAGTGA
AAGTGCAAGAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTGCAAGAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTGCAA
GAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTGCAAGAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTGCAAGAAGTAGC
GAAACCTAAGGAAGAAGTGAAAGTGCAAGAAGAAGCAAAAGCTAAGGAAGAAGCGAAAGTACAGGAAATAGCAAAGGCTA
AGGAAGAAGTGAAAGTGCAAGAGATAGCCAAAGCTAAAGAAGAAGCAAAAGCACAAGAGATAGCCAAAGCTAAGGAAGAA
GTAAAAGCACAAGAGATAGCCAAAGCTAAGGAAGAGGCGAAAGCACGAGAAATAGCAAAGGCTAAAGAAGAAGCAAAAGC
ACGAGAAATAGCCAAAGCTAAAGAAGAAGCAAAAGCGCAAGAAATAGCCAAAGCTAAGGAAGAGGCGAAAGCACGAGAAA
TAGCCAAAGCTAAGGAAGAGGCGAAAGCACGAGAAATAGCCAAAGCTAAGGAAGAGGCGAAAGCACGAGAAATAGCAAAG
GCTAAGGAAGAAGCGAAAGCACGAGAAATAGCCAAAGCCAAGGAAGAGGCAAAAGCACGAGAAGCACTAAAGGCAAAAGA
AGAGTCTAAAAATAACGCGCAGTCTGCTAAACGTGAATTAACGGTGGTGGCGACAGCATATACTGCTGATCCGAGTGAGA
ATGGTACATATGGTGGACGCGTTTTAACTGCGATGGGGCATGATTTAACGGCTAATCCAAATATGAGAATTATCGCAGTA
GATCCGAAAGTAATCCCATTAGGATCTAAAGTATGGGTAGAAGGTTATGGAGAAGCAATCGCTGGAGATACCGGAAGTGC
AATTAAAGGTAATCGCATTGATGTATTAATGGGTTCAAAAAGTAAAGCGATGAATTGGGGAAGACAAACTGTTAAAGTGA
AAATTTTATAA

Upstream 100 bases:

>100_bases
TATTAAGTCGTATTAATATATCTGTTGCGAATGCTTTCATTAAATCTCTTATTTTAATGGGAGTATTTGATAGAATTCAA
AAAATATAATGGAGGTTAAT

Downstream 100 bases:

>100_bases
TTTATATAGTTTTCTAGATAGAAGTCAGTTTTCTTTATTGAGGCTGGCTTTTATTTTTTTTTCGAAATATTCTTGTAGTT
GCTTTGCGATTGTTGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF
TKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQVKDGWLQFEYKGKTAYVNVSFLSSKAPIEKKADEKTKQVAK
VQKSVKAKEEAKTQKITKAKETIKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
EVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEEAKAKEEAKVQEIAKAKEEVKVQEIAKAKEEAKAQEIAKAKEE
VKAQEIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAQEIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAREIAK
AKEEAKAREIAKAKEEAKAREALKAKEESKNNAQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAV
DPKVIPLGSKVWVEGYGEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL

Sequences:

>Translated_536_residues
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF
TKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQVKDGWLQFEYKGKTAYVNVSFLSSKAPIEKKADEKTKQVAK
VQKSVKAKEEAKTQKITKAKETIKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
EVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEEAKAKEEAKVQEIAKAKEEVKVQEIAKAKEEAKAQEIAKAKEE
VKAQEIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAQEIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAREIAK
AKEEAKAREIAKAKEEAKAREALKAKEESKNNAQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAV
DPKVIPLGSKVWVEGYGEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL
>Mature_536_residues
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF
TKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQVKDGWLQFEYKGKTAYVNVSFLSSKAPIEKKADEKTKQVAK
VQKSVKAKEEAKTQKITKAKETIKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
EVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEEAKAKEEAKVQEIAKAKEEVKVQEIAKAKEEAKAQEIAKAKEE
VKAQEIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAQEIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAREIAK
AKEEAKAREIAKAKEEAKAREALKAKEESKNNAQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAV
DPKVIPLGSKVWVEGYGEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF06725 3D; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 59076; Mature: 59076

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEC
EDGWSKIELNGKEVFVSSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQV
CCCCCEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KDGWLQFEYKGKTAYVNVSFLSSKAPIEKKADEKTKQVAKVQKSVKAKEEAKTQKITKAK
HCCCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETIKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
HHCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
EVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEEAKAKEEAKVQEIAKAKEEVKVQ
HHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAKAKEEAKAQEIAKAKEEVKAQEIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALKAKEESKNNAQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAV
HHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE
DPKVIPLGSKVWVEGYGEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL
CCEEEECCCEEEECCCCCHHCCCCCCCCCCCEEEEEECCCHHHHHCCCEEEEEEEC
>Mature Secondary Structure
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEC
EDGWSKIELNGKEVFVSSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQV
CCCCCEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KDGWLQFEYKGKTAYVNVSFLSSKAPIEKKADEKTKQVAKVQKSVKAKEEAKTQKITKAK
HCCCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETIKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
HHCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
EVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEEAKAKEEAKVQEIAKAKEEVKVQ
HHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAKAKEEAKAQEIAKAKEEVKAQEIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAREIAKAKEEAKAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALKAKEESKNNAQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAV
HHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE
DPKVIPLGSKVWVEGYGEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL
CCEEEECCCEEEECCCCCHHCCCCCCCCCCCEEEEEECCCHHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]