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The map label for this gene is oppA [H]

Identifier: 222096379

GI number: 222096379

Start: 2656969

End: 2658705

Strand: Reverse

Name: oppA [H]

Synonym: BCQ_2719

Alternate gene names: 222096379

Gene position: 2658705-2656969 (Counterclockwise)

Preceding gene: 222096381

Following gene: 222096378

Centisome position: 50.99

GC content: 33.39

Gene sequence:

>1737_bases
ATGTTTATTTTAGATCAATATATTGAATTATGGTGTGCCTATGGTAAAGAGAGACAAGAAGGCGAACAATTTGAAGTAAC
AGTACAAATGATTGCAGAAACATTATTTTGTACAGAACGGAATAGTAAATTAATTATCAAAAAGTTAGATGAATTAAATT
GGATTGCTTGGTTTCCAGGGCGCGGGAGAGGGAATCGTTCTAAATTAATATTTCAAAAGCAACCAATTCCACTAATTTTA
GAAAGAGGAAAAGAATTAACGAAAAAAGGAGATGTGAAAAGTGGAATCTCATTTGTGGAGCGCTACAGCTCGCAATTTCC
GTCAGTAAAGAAAGAGTATGAAGTTTGGATAGATTCCATATTTGGTCATCAAATAGAAAGGACATCCGAAGGGAGAAGAG
ATGTCCTTCGTTTGCAGGTTCAAATGAATTTAGATATTGCATTAGATCCGGTTTACGCTACGATGCGATCGGAATGTCAT
ATGGTTAAACATATTTTTGATACACTCGTATATGTAAATGAGGAAACAAATTCTATAGAACCAAGACTTGCTTTTCAATG
GGAATATAATGATGCTGAAAAGGTATGGACTTTTTATTTACGAAAAGGCGTTCGTCTTCATAATGGAAAACGACTTACTG
TACATCATGTTATACATTCATTGAATCGATTTATGAAAGCTGAAAACAACCCACACGCATGGATGTTACAACATGTTGAA
AGTTTCCGTGCAGTGGATGAATTTGTTGTTGAAATTCAATTACATACGGTAAATAGGATGTTTTTACATATGCTAAGCGC
AGAACAGTGTTCTATCGTAATTGAAGATGAAGCAGGAAACTTCATAGGTACAGGGCCTTTTATATTACGAGAGAAGAATA
CACATTTATTTGCATTAGAAGTACATGATTTATATTATCGTGAAAGACCTTTTCTTGACCGAATTGAACTATTGAATGTA
GAGAAAAATGTAAATACATATGACGTATTAATAAAGGCACAGTATAAAGATAAAGAAAATCTTAATAAAGAACTTTCACG
GCTTGAATCGAATGTGACATATGTAACGTGTAATCTTGTAAAAAAAGGGCCAATGCAAGATGAGCTGTTTCGAAAAGCGC
TATACAAAATTATTCATGGTGATAAAATCGTTCAAGAACTCGGCGGAGAACGTGGAGAAGTGGCAAAGAAACTAATATTA
GCAAATGAAAGTATAGTAGATATTGACGAAGATATTCAAAGTTTAATTAAAAGGAGTACGTATCATAGTGAAGTGCTACA
ACTATACACATTTAAAGGACGAGATCACGTTGAAGATGCGCAATGGATACAAAAAGAGTGTGCGAAGTACGGGATTCGTG
TAGAAAATAATTTTCTTGAAATAGAAGAGTTATTGGAAATAAATACGATACAAAAAGCTGATATGATGCACGATAGTGCA
ACGATTAGCGAACGAATAGAAGATAGTCTACTATACATGTTTCTTACAAAAAATAGTTTTATTCATGGGCAAAGCAGCAT
GGACTTTCATGCAATGTTATCTCCTTATTTCAAACAAGAACAAGTAGAGAATAGAGTTACACTGTTACGCGATATTGAGG
ACACATTGTTACGTCAAATTCATGTTATTCCTTTATATCGCAACAAACAACAAGTAACTTCTCATGAAAAAGTACAAAAT
ATAATGATTAATTCACAAGGGTGGATTGATTTTTATAGAATATGGTTTAAACCTTGA

Upstream 100 bases:

>100_bases
ATTGTTTCCTCCTTTCTATATTGAAATGATAAGATGAAAGGAGAAATGGAAAAAGGGTAGAAACAAAAGGGGTTATTTTT
CACCTTTTAGGGGGATTATG

Downstream 100 bases:

>100_bases
TAGATAAAGGCTCTTATGCATTTTTTATAAGATGTGTAAGAGCCTTTTTGTATGTAAAATAGGATTGTTTTACACATTGT
TACGCTACTTGTGATAAAAG

Product: oligopeptide ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MFILDQYIELWCAYGKERQEGEQFEVTVQMIAETLFCTERNSKLIIKKLDELNWIAWFPGRGRGNRSKLIFQKQPIPLIL
ERGKELTKKGDVKSGISFVERYSSQFPSVKKEYEVWIDSIFGHQIERTSEGRRDVLRLQVQMNLDIALDPVYATMRSECH
MVKHIFDTLVYVNEETNSIEPRLAFQWEYNDAEKVWTFYLRKGVRLHNGKRLTVHHVIHSLNRFMKAENNPHAWMLQHVE
SFRAVDEFVVEIQLHTVNRMFLHMLSAEQCSIVIEDEAGNFIGTGPFILREKNTHLFALEVHDLYYRERPFLDRIELLNV
EKNVNTYDVLIKAQYKDKENLNKELSRLESNVTYVTCNLVKKGPMQDELFRKALYKIIHGDKIVQELGGERGEVAKKLIL
ANESIVDIDEDIQSLIKRSTYHSEVLQLYTFKGRDHVEDAQWIQKECAKYGIRVENNFLEIEELLEINTIQKADMMHDSA
TISERIEDSLLYMFLTKNSFIHGQSSMDFHAMLSPYFKQEQVENRVTLLRDIEDTLLRQIHVIPLYRNKQQVTSHEKVQN
IMINSQGWIDFYRIWFKP

Sequences:

>Translated_578_residues
MFILDQYIELWCAYGKERQEGEQFEVTVQMIAETLFCTERNSKLIIKKLDELNWIAWFPGRGRGNRSKLIFQKQPIPLIL
ERGKELTKKGDVKSGISFVERYSSQFPSVKKEYEVWIDSIFGHQIERTSEGRRDVLRLQVQMNLDIALDPVYATMRSECH
MVKHIFDTLVYVNEETNSIEPRLAFQWEYNDAEKVWTFYLRKGVRLHNGKRLTVHHVIHSLNRFMKAENNPHAWMLQHVE
SFRAVDEFVVEIQLHTVNRMFLHMLSAEQCSIVIEDEAGNFIGTGPFILREKNTHLFALEVHDLYYRERPFLDRIELLNV
EKNVNTYDVLIKAQYKDKENLNKELSRLESNVTYVTCNLVKKGPMQDELFRKALYKIIHGDKIVQELGGERGEVAKKLIL
ANESIVDIDEDIQSLIKRSTYHSEVLQLYTFKGRDHVEDAQWIQKECAKYGIRVENNFLEIEELLEINTIQKADMMHDSA
TISERIEDSLLYMFLTKNSFIHGQSSMDFHAMLSPYFKQEQVENRVTLLRDIEDTLLRQIHVIPLYRNKQQVTSHEKVQN
IMINSQGWIDFYRIWFKP
>Mature_578_residues
MFILDQYIELWCAYGKERQEGEQFEVTVQMIAETLFCTERNSKLIIKKLDELNWIAWFPGRGRGNRSKLIFQKQPIPLIL
ERGKELTKKGDVKSGISFVERYSSQFPSVKKEYEVWIDSIFGHQIERTSEGRRDVLRLQVQMNLDIALDPVYATMRSECH
MVKHIFDTLVYVNEETNSIEPRLAFQWEYNDAEKVWTFYLRKGVRLHNGKRLTVHHVIHSLNRFMKAENNPHAWMLQHVE
SFRAVDEFVVEIQLHTVNRMFLHMLSAEQCSIVIEDEAGNFIGTGPFILREKNTHLFALEVHDLYYRERPFLDRIELLNV
EKNVNTYDVLIKAQYKDKENLNKELSRLESNVTYVTCNLVKKGPMQDELFRKALYKIIHGDKIVQELGGERGEVAKKLIL
ANESIVDIDEDIQSLIKRSTYHSEVLQLYTFKGRDHVEDAQWIQKECAKYGIRVENNFLEIEELLEINTIQKADMMHDSA
TISERIEDSLLYMFLTKNSFIHGQSSMDFHAMLSPYFKQEQVENRVTLLRDIEDTLLRQIHVIPLYRNKQQVTSHEKVQN
IMINSQGWIDFYRIWFKP

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786650, Length=602, Percent_Identity=22.9235880398671, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1786256, Length=360, Percent_Identity=23.0555555555556, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1789966, Length=299, Percent_Identity=26.4214046822742, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 68310; Mature: 68310

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFILDQYIELWCAYGKERQEGEQFEVTVQMIAETLFCTERNSKLIIKKLDELNWIAWFPG
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHEEHHCCCCEEEECCC
RGRGNRSKLIFQKQPIPLILERGKELTKKGDVKSGISFVERYSSQFPSVKKEYEVWIDSI
CCCCCCCCEEEECCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FGHQIERTSEGRRDVLRLQVQMNLDIALDPVYATMRSECHMVKHIFDTLVYVNEETNSIE
HHHHHHHCCCCHHEEEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
PRLAFQWEYNDAEKVWTFYLRKGVRLHNGKRLTVHHVIHSLNRFMKAENNPHAWMLQHVE
CEEEEEEECCCHHHHHHHHHHCCCEECCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SFRAVDEFVVEIQLHTVNRMFLHMLSAEQCSIVIEDEAGNFIGTGPFILREKNTHLFALE
HHHHHHHHHHEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEECCCEEEEEE
VHDLYYRERPFLDRIELLNVEKNVNTYDVLIKAQYKDKENLNKELSRLESNVTYVTCNLV
EHHHHHCCCCCHHHHHHEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEE
KKGPMQDELFRKALYKIIHGDKIVQELGGERGEVAKKLILANESIVDIDEDIQSLIKRST
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
YHSEVLQLYTFKGRDHVEDAQWIQKECAKYGIRVENNFLEIEELLEINTIQKADMMHDSA
HHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCHH
TISERIEDSLLYMFLTKNSFIHGQSSMDFHAMLSPYFKQEQVENRVTLLRDIEDTLLRQI
HHHHHHHHHEEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
HVIPLYRNKQQVTSHEKVQNIMINSQGWIDFYRIWFKP
EEEEEECCHHHHHHHHHHHHHEECCCCCEEEEEEEECC
>Mature Secondary Structure
MFILDQYIELWCAYGKERQEGEQFEVTVQMIAETLFCTERNSKLIIKKLDELNWIAWFPG
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHEEHHCCCCEEEECCC
RGRGNRSKLIFQKQPIPLILERGKELTKKGDVKSGISFVERYSSQFPSVKKEYEVWIDSI
CCCCCCCCEEEECCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FGHQIERTSEGRRDVLRLQVQMNLDIALDPVYATMRSECHMVKHIFDTLVYVNEETNSIE
HHHHHHHCCCCHHEEEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
PRLAFQWEYNDAEKVWTFYLRKGVRLHNGKRLTVHHVIHSLNRFMKAENNPHAWMLQHVE
CEEEEEEECCCHHHHHHHHHHCCCEECCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SFRAVDEFVVEIQLHTVNRMFLHMLSAEQCSIVIEDEAGNFIGTGPFILREKNTHLFALE
HHHHHHHHHHEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEECCCEEEEEE
VHDLYYRERPFLDRIELLNVEKNVNTYDVLIKAQYKDKENLNKELSRLESNVTYVTCNLV
EHHHHHCCCCCHHHHHHEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEE
KKGPMQDELFRKALYKIIHGDKIVQELGGERGEVAKKLILANESIVDIDEDIQSLIKRST
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
YHSEVLQLYTFKGRDHVEDAQWIQKECAKYGIRVENNFLEIEELLEINTIQKADMMHDSA
HHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCHH
TISERIEDSLLYMFLTKNSFIHGQSSMDFHAMLSPYFKQEQVENRVTLLRDIEDTLLRQI
HHHHHHHHHEEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
HVIPLYRNKQQVTSHEKVQNIMINSQGWIDFYRIWFKP
EEEEEECCHHHHHHHHHHHHHEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]