Click here to switch to the map view.

The map label for this gene is pepF

Identifier: 222096323

GI number: 222096323

Start: 2605143

End: 2606789

Strand: Reverse

Name: pepF

Synonym: BCQ_2663

Alternate gene names: NA

Gene position: 2606789-2605143 (Counterclockwise)

Preceding gene: 222096324

Following gene: 222096321

Centisome position: 49.99

GC content: 32.91

Gene sequence:

>1647_bases
ATGTTTAATGATTTGGAGAGTAAATTACAGTCACTTTTAGAGCGAAATATTACTTCTGTTTTAGAATTAGAAAATTGGCT
TTTCGATGAATTGCGTGTAAACGCTGAAATAGAAGAGAAGATAACAAGTAGTTTAATCGCCACGTATAGAGATACAAATG
ACAGAAATAAACGTAATTTACATATGTATAATCAAAATACAATTCAACCACTTTTAAAAAGATACAATGCAAAGTTTGAC
CAAAAATTTATAGAGTGTCCGTTTTCTAACTTATTAGACGAGCGAAAATATGCATTTATGAAAAAAGCAAGATTTGTAAA
GAGTAAAATGTTTAATGAAAAAAACATTGCTCTTTCTATTAAAGAGCAAGAGTGCATTACGAAGTATAGAGAAATAATGT
CTAACATAACAATTAATTGGGAAGGCGAGCAAAAGACGTATGCACACGTTAAAGCAAAGCTAGATAACCCAAATAGAGCT
ATTCGCGAAAAAGCTTGGTACGCTTTATGTGAAGCAAGGAGTGCAGTGAAACCAGAAGTGGATCGTATTATGAATGAACT
TATACAATTGCGGAATGAGATCGCTTTAAATGCAGGATTTCATAATTATAGTGAATATGCCTTTAAACAAAAAAACAGAG
ATTACAGTATTGATGATTGCTATAAGCTCCATGAATCTATAGAAAAGTATGTTGTACCAATTTGGAAACAGTTAGGAAGT
ATTTCTAAAAAGAATCTCGGTGTAAAAACGTATCGCCCTTGGGATCTTTCTCCATGTAATTTACCAAAAGTCCCATTCCA
AAATGTGATTGATTTATTAAATGGTGTGGAAGAAATATTTCGAAAGACAGATTTATATTTTTATGAGAAATTTATTCATA
TAAGGAAAGCTGGATGCATTGACGTAGAAGAACGTGAAAATAAAGCACCAGGAGCTATTTGTTTTACCTTGCCTCATAGT
AAAGAGGTTTTTGTGTATTCTAATTTTAGTCCTTCATTTTATGCAATTAATGCACTTATACATGAAGTGGGGCATGCATT
TCATTTTTATAAACAATTTAAAAACGATAGTAGTATGCAGGAAAGATATCTGCGCGAAGAGGTGGCTGAACTTTATTCCC
TCAGTCTTGAGTTATTAGTAATGGATAAGCTGAATGTTTTTTATAAGCAAGAGGATGAATATAAAGAAGTGCAACGCGTA
CAAATATATCGTGCTTTGTCTTTATTAATGTCGTCAATTGCAGGAGATGTATTCCAGCACTGGATCTATGCGAATCCAAA
CCATACACCAGAAGAACGTGATAAGAAATACGCCGAACTATGCAAAAGATATCAATATTCAACAGTCGACCTTGCAGGAT
TAGAGGATGAAATCGGTGCAAGTTGGATAGAGTCCTTTCACTATGTTCAGTTTCCTTTTTACAAAATTGAATATGCAATT
GCACAAATAGGAGCAATGCAATTGTTTCAAATTTACTGGGAAGACCCAGAAAAAGCGATTGCTTTCTTTAAAGAAGGTGC
GAGTGCAGATTGGAATTTATCTATACAAGAAATATATGAAAAAACAGGTGTCACGTTTGATTTTTCGGAAGAAAGGATAG
AAAGTACTGCAAGTGTTATTTTGGATGTGATCAATGAATTAAAATAA

Upstream 100 bases:

>100_bases
TTGAGTATGATTTAACAAAAAGACAAGTAGTCAGATTGGCTACTTGTCTTTTTCTTTCTCTAAAAAACAGAAAATTAGAT
TTTTAAAAGGAGAGTTGTGT

Downstream 100 bases:

>100_bases
GGATAGCATTCGCTATCCTTATAACTGTTTATTCGTAGATTTTTTCTTGTTTATATAAAATGTAATAATAGCTGTAATGA
GAAAAATAGGTATAGCATAC

Product: oligoendopeptidase f, peptidase m3 family protein

Products: NA

Alternate protein names: Oligoendopeptidase M3 Family; M3 Family Oligoendopeptidase; Oligoendopeptidase; Peptidase M3 Family Protein; Peptidase M3A And M3B Thimet/Oligopeptidase F; Oligopeptidase; Oligoendopeptidase M3 Family Protein; Truncated Oligoendopeptidase F; Peptidase M3 Oligoendopeptidase F; M3B Family Peptidase; Exported Peptidase

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MFNDLESKLQSLLERNITSVLELENWLFDELRVNAEIEEKITSSLIATYRDTNDRNKRNLHMYNQNTIQPLLKRYNAKFD
QKFIECPFSNLLDERKYAFMKKARFVKSKMFNEKNIALSIKEQECITKYREIMSNITINWEGEQKTYAHVKAKLDNPNRA
IREKAWYALCEARSAVKPEVDRIMNELIQLRNEIALNAGFHNYSEYAFKQKNRDYSIDDCYKLHESIEKYVVPIWKQLGS
ISKKNLGVKTYRPWDLSPCNLPKVPFQNVIDLLNGVEEIFRKTDLYFYEKFIHIRKAGCIDVEERENKAPGAICFTLPHS
KEVFVYSNFSPSFYAINALIHEVGHAFHFYKQFKNDSSMQERYLREEVAELYSLSLELLVMDKLNVFYKQEDEYKEVQRV
QIYRALSLLMSSIAGDVFQHWIYANPNHTPEERDKKYAELCKRYQYSTVDLAGLEDEIGASWIESFHYVQFPFYKIEYAI
AQIGAMQLFQIYWEDPEKAIAFFKEGASADWNLSIQEIYEKTGVTFDFSEERIESTASVILDVINELK

Sequences:

>Translated_548_residues
MFNDLESKLQSLLERNITSVLELENWLFDELRVNAEIEEKITSSLIATYRDTNDRNKRNLHMYNQNTIQPLLKRYNAKFD
QKFIECPFSNLLDERKYAFMKKARFVKSKMFNEKNIALSIKEQECITKYREIMSNITINWEGEQKTYAHVKAKLDNPNRA
IREKAWYALCEARSAVKPEVDRIMNELIQLRNEIALNAGFHNYSEYAFKQKNRDYSIDDCYKLHESIEKYVVPIWKQLGS
ISKKNLGVKTYRPWDLSPCNLPKVPFQNVIDLLNGVEEIFRKTDLYFYEKFIHIRKAGCIDVEERENKAPGAICFTLPHS
KEVFVYSNFSPSFYAINALIHEVGHAFHFYKQFKNDSSMQERYLREEVAELYSLSLELLVMDKLNVFYKQEDEYKEVQRV
QIYRALSLLMSSIAGDVFQHWIYANPNHTPEERDKKYAELCKRYQYSTVDLAGLEDEIGASWIESFHYVQFPFYKIEYAI
AQIGAMQLFQIYWEDPEKAIAFFKEGASADWNLSIQEIYEKTGVTFDFSEERIESTASVILDVINELK
>Mature_548_residues
MFNDLESKLQSLLERNITSVLELENWLFDELRVNAEIEEKITSSLIATYRDTNDRNKRNLHMYNQNTIQPLLKRYNAKFD
QKFIECPFSNLLDERKYAFMKKARFVKSKMFNEKNIALSIKEQECITKYREIMSNITINWEGEQKTYAHVKAKLDNPNRA
IREKAWYALCEARSAVKPEVDRIMNELIQLRNEIALNAGFHNYSEYAFKQKNRDYSIDDCYKLHESIEKYVVPIWKQLGS
ISKKNLGVKTYRPWDLSPCNLPKVPFQNVIDLLNGVEEIFRKTDLYFYEKFIHIRKAGCIDVEERENKAPGAICFTLPHS
KEVFVYSNFSPSFYAINALIHEVGHAFHFYKQFKNDSSMQERYLREEVAELYSLSLELLVMDKLNVFYKQEDEYKEVQRV
QIYRALSLLMSSIAGDVFQHWIYANPNHTPEERDKKYAELCKRYQYSTVDLAGLEDEIGASWIESFHYVQFPFYKIEYAI
AQIGAMQLFQIYWEDPEKAIAFFKEGASADWNLSIQEIYEKTGVTFDFSEERIESTASVILDVINELK

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64762; Mature: 64762

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNDLESKLQSLLERNITSVLELENWLFDELRVNAEIEEKITSSLIATYRDTNDRNKRNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCE
HMYNQNTIQPLLKRYNAKFDQKFIECPFSNLLDERKYAFMKKARFVKSKMFNEKNIALSI
EECCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
KEQECITKYREIMSNITINWEGEQKTYAHVKAKLDNPNRAIREKAWYALCEARSAVKPEV
HHHHHHHHHHHHHHCCEEEECCCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCHHH
DRIMNELIQLRNEIALNAGFHNYSEYAFKQKNRDYSIDDCYKLHESIEKYVVPIWKQLGS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ISKKNLGVKTYRPWDLSPCNLPKVPFQNVIDLLNGVEEIFRKTDLYFYEKFIHIRKAGCI
CHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DVEERENKAPGAICFTLPHSKEVFVYSNFSPSFYAINALIHEVGHAFHFYKQFKNDSSMQ
CCHHHCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ERYLREEVAELYSLSLELLVMDKLNVFYKQEDEYKEVQRVQIYRALSLLMSSIAGDVFQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIYANPNHTPEERDKKYAELCKRYQYSTVDLAGLEDEIGASWIESFHYVQFPFYKIEYAI
HEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHH
AQIGAMQLFQIYWEDPEKAIAFFKEGASADWNLSIQEIYEKTGVTFDFSEERIESTASVI
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEECCCHHHHHHHHHHH
LDVINELK
HHHHHHCC
>Mature Secondary Structure
MFNDLESKLQSLLERNITSVLELENWLFDELRVNAEIEEKITSSLIATYRDTNDRNKRNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCE
HMYNQNTIQPLLKRYNAKFDQKFIECPFSNLLDERKYAFMKKARFVKSKMFNEKNIALSI
EECCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
KEQECITKYREIMSNITINWEGEQKTYAHVKAKLDNPNRAIREKAWYALCEARSAVKPEV
HHHHHHHHHHHHHHCCEEEECCCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCHHH
DRIMNELIQLRNEIALNAGFHNYSEYAFKQKNRDYSIDDCYKLHESIEKYVVPIWKQLGS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ISKKNLGVKTYRPWDLSPCNLPKVPFQNVIDLLNGVEEIFRKTDLYFYEKFIHIRKAGCI
CHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DVEERENKAPGAICFTLPHSKEVFVYSNFSPSFYAINALIHEVGHAFHFYKQFKNDSSMQ
CCHHHCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ERYLREEVAELYSLSLELLVMDKLNVFYKQEDEYKEVQRVQIYRALSLLMSSIAGDVFQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIYANPNHTPEERDKKYAELCKRYQYSTVDLAGLEDEIGASWIESFHYVQFPFYKIEYAI
HEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHH
AQIGAMQLFQIYWEDPEKAIAFFKEGASADWNLSIQEIYEKTGVTFDFSEERIESTASVI
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEECCCHHHHHHHHHHH
LDVINELK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA