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The map label for this gene is yjjU [H]

Identifier: 222096215

GI number: 222096215

Start: 2514724

End: 2515539

Strand: Reverse

Name: yjjU [H]

Synonym: BCQ_2555

Alternate gene names: 222096215

Gene position: 2515539-2514724 (Counterclockwise)

Preceding gene: 222096217

Following gene: 222096214

Centisome position: 48.24

GC content: 31.25

Gene sequence:

>816_bases
ATGAAAGGTTTATATACTGCAGGCGTACTCGAATATTTTATGGAAAAGAACTTATTTTTCCCTTATGTAGTTGGCGTATC
CGCTGGAGCTTGTATGGGAGCAACTTATTTATCACGTCAAAAAGGGAGAAATAAAAAAGTAAATACAGAGTTAGTAGCAG
ATCATCGTTATATATCTTATCGAAATTTAATTCGAAAACGTGAATTATTTGGAATGGATTTTTTATTTGATGAAGTACCG
AATAAAATTGTACCGTTTGATTTTCAAACTTTCTTAAACTCAAATGAACAGTTTGTTATAGGAACGACTGACTGCGAATC
AGGAAAAGCTATTTATTATAATAAAGCAGAACACGGAAATGATATTTTAAAAATCATTCGTGCATCTAGCTCAGTACCGT
TTATAGCGCCTGCTGTAGAATATGATAATCGAAAATTACTAGATGGAGGAATTATAGATCCTATTCCGGTTTTAAAAGCG
CAAACTGATGGTTATGAAAAGAACGTTGTAATTATGACAAAACCAGAAGGATATGAGAAGCAACGAAATAAATTTTCTGG
CCTAGCTAAAATTTTATATAGGAAATATCCGAATATCGCACAATCTTTAGTAGAACATTATCGTTTTTATAATGAGACGA
TATCTTATATGAATCAAATAGAACAAAAAGACAACTTTTATATTATTCAGCCTAGCGTACAGCTTCCAATAAGCGGAATA
GAAAGAAGTAAAGAAAAGCTCGTTAATTTATATAATCTTGGCTATACGGATGCTCAATATCATTATGAAAACTTATTAAA
TTGGATAGAGAACTAA

Upstream 100 bases:

>100_bases
ATAACCTCATCTTAATATCTTATGCTAATATGTAAGTAAAAAAAAAGAAGCAGAGGGATATAGCATGAAAAATATCGGTT
TAGTATTAGAAGGCGGAGGA

Downstream 100 bases:

>100_bases
AGGGGTGGAAAGTTGAAGTTAGGAAAAAGGGTTATTTTTAATGAATTGCAGAAAATGCCTAGTCCACTGTATAAACCGTT
TCCGAATTGTGACATTCGAA

Product: serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKGLYTAGVLEYFMEKNLFFPYVVGVSAGACMGATYLSRQKGRNKKVNTELVADHRYISYRNLIRKRELFGMDFLFDEVP
NKIVPFDFQTFLNSNEQFVIGTTDCESGKAIYYNKAEHGNDILKIIRASSSVPFIAPAVEYDNRKLLDGGIIDPIPVLKA
QTDGYEKNVVIMTKPEGYEKQRNKFSGLAKILYRKYPNIAQSLVEHYRFYNETISYMNQIEQKDNFYIIQPSVQLPISGI
ERSKEKLVNLYNLGYTDAQYHYENLLNWIEN

Sequences:

>Translated_271_residues
MKGLYTAGVLEYFMEKNLFFPYVVGVSAGACMGATYLSRQKGRNKKVNTELVADHRYISYRNLIRKRELFGMDFLFDEVP
NKIVPFDFQTFLNSNEQFVIGTTDCESGKAIYYNKAEHGNDILKIIRASSSVPFIAPAVEYDNRKLLDGGIIDPIPVLKA
QTDGYEKNVVIMTKPEGYEKQRNKFSGLAKILYRKYPNIAQSLVEHYRFYNETISYMNQIEQKDNFYIIQPSVQLPISGI
ERSKEKLVNLYNLGYTDAQYHYENLLNWIEN
>Mature_271_residues
MKGLYTAGVLEYFMEKNLFFPYVVGVSAGACMGATYLSRQKGRNKKVNTELVADHRYISYRNLIRKRELFGMDFLFDEVP
NKIVPFDFQTFLNSNEQFVIGTTDCESGKAIYYNKAEHGNDILKIIRASSSVPFIAPAVEYDNRKLLDGGIIDPIPVLKA
QTDGYEKNVVIMTKPEGYEKQRNKFSGLAKILYRKYPNIAQSLVEHYRFYNETISYMNQIEQKDNFYIIQPSVQLPISGI
ERSKEKLVNLYNLGYTDAQYHYENLLNWIEN

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=266, Percent_Identity=25.5639097744361, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31367; Mature: 31367

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLYTAGVLEYFMEKNLFFPYVVGVSAGACMGATYLSRQKGRNKKVNTELVADHRYISY
CCCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHH
RNLIRKRELFGMDFLFDEVPNKIVPFDFQTFLNSNEQFVIGTTDCESGKAIYYNKAEHGN
HHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCH
DILKIIRASSSVPFIAPAVEYDNRKLLDGGIIDPIPVLKAQTDGYEKNVVIMTKPEGYEK
HHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCEEECCCCCCCCEEEEECCCCHHH
QRNKFSGLAKILYRKYPNIAQSLVEHYRFYNETISYMNQIEQKDNFYIIQPSVQLPISGI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHH
ERSKEKLVNLYNLGYTDAQYHYENLLNWIEN
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGLYTAGVLEYFMEKNLFFPYVVGVSAGACMGATYLSRQKGRNKKVNTELVADHRYISY
CCCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHH
RNLIRKRELFGMDFLFDEVPNKIVPFDFQTFLNSNEQFVIGTTDCESGKAIYYNKAEHGN
HHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCH
DILKIIRASSSVPFIAPAVEYDNRKLLDGGIIDPIPVLKAQTDGYEKNVVIMTKPEGYEK
HHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCEEECCCCCCCCEEEEECCCCHHH
QRNKFSGLAKILYRKYPNIAQSLVEHYRFYNETISYMNQIEQKDNFYIIQPSVQLPISGI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHH
ERSKEKLVNLYNLGYTDAQYHYENLLNWIEN
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]