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The map label for this gene is yaaJ [C]

Identifier: 222095967

GI number: 222095967

Start: 2274861

End: 2276228

Strand: Reverse

Name: yaaJ [C]

Synonym: BCQ_2307

Alternate gene names: 222095967

Gene position: 2276228-2274861 (Counterclockwise)

Preceding gene: 222095968

Following gene: 222095966

Centisome position: 43.65

GC content: 38.67

Gene sequence:

>1368_bases
ATGGAGACAGTAAGTAAAGTATTAGAACAAATCAATCACTATGTGTGGGGATTACCAACGTTGTTGTTACTCGTTGGTAC
TGGTATTATTCTCACAGTGCGTTTAAAAGGTTTACAGTTTAGTAAACTATTATACGCTCACAAACTAGCTTTTAAAAAAT
CAGAAGATACATCTTCCTCTGGAGATATTAGCCACTTCCAAGCACTTATGACAGCTATGGCGGCAACGATTGGTATGGGA
AATATAGCTGGTGTTGCAACCGCTGTGACGATTGGTGGGCCTGGTGCAATCTTTTGGATGTGGATTACTGCTTTATTCGG
TATGGCAACAAAATATGCCGAAGCAATTCTTGCGGTGAAATACCGTGTTAGTAATGAAAATGGCGAATATTCAGGTGGAC
CTATGTACTATTTAGAACGTGGTTTAGGTAAGAAATGGCTTGCAGTTTTATTCGCTATATTCGGTACAACTGCTTCTTTC
GGTATCGGGAATATGGTGCAATCTAATTCAGTGGCAGAGGCAATGCGAATTAATTTCTCTTTCCCCCCTGCTTTAACTGG
TATAGTAATGTCATTTTTAATCGCTATCGTTATTTTAGGCGGTGTAAAAAAAATCGGGAAAGTAACAGGATATGTTGTTC
CTATTAAAGCTTTCTTTTATATCATTGCTGGTCTTATTATTATTTTCTATCACTACGATCAAATTCCTGAAGCATTTTCA
CTTATTTTTTCTGGTGCGTTTAATGGTACTGCAGCTGCTGGTGGTTTTATCGGTGCAACAGTTGCATCAGCTATTCAAAT
TGGAATGGCGCGCGGCGTATTTGCGAACGAAGCTGGTTTAGGGAGCGCCCCTATTGCCGCGGCGGCGGCAAAAACAGATT
CCCCTGCAAAACAAGCTTTAGTTTCAATGACTGGTACTTTTCTAGATACGTTTATTGTATGTACAATTACAGGGCTAGTA
TTAATTACTACAGGCGCATGGAAGTCTGGTAAAACTGGGGTTGAAGCTACAACACTTGCGTTCCAATCTGTATTCGGTAC
TGCTGGTAGTATGATTCTTGGTATCGCAATTATTTTATTCGCCTACTCTACTATTTTAGGCTGGTCGTATTACGGTGAGA
AATGCGTGGCTTATTTATTTGGAGAAAGTGCTGTTAAATATTATAAAGCAATCTTTATTGTCATGATTGCTATTGGTGCG
AATTTAAAATTAGGCATCGTATGGACATTTGCGGATATTGCAAATGGACTTATGGCGATTCCAAACTTAATTGGTCTTAT
TGGGTTAAGTGGTATTGTTGTTGCTGAAACGAATCGCTTTTTACAAGCAGAGAAATTGAAAGAAAATAATAAAAAACAGG
CAAGTTAA

Upstream 100 bases:

>100_bases
TGCCGATTTGTATCGGTTTATTTTTCTATCCCTTGTTTCTCCAGAGACCATTTCATTTACTTGAAGTGGTTTTTATTTTT
TCTAAAAAAGGAGAATAAAG

Downstream 100 bases:

>100_bases
TCTATGAAAAAAGGAATGACTCATACATGATGAGCATTCCTTTTTTCATCCCCTCTTTTACTTTATTACTATCATTAAAA
ATATATTTATATCAATGTTT

Product: sodium/alanine symporter family protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
METVSKVLEQINHYVWGLPTLLLLVGTGIILTVRLKGLQFSKLLYAHKLAFKKSEDTSSSGDISHFQALMTAMAATIGMG
NIAGVATAVTIGGPGAIFWMWITALFGMATKYAEAILAVKYRVSNENGEYSGGPMYYLERGLGKKWLAVLFAIFGTTASF
GIGNMVQSNSVAEAMRINFSFPPALTGIVMSFLIAIVILGGVKKIGKVTGYVVPIKAFFYIIAGLIIIFYHYDQIPEAFS
LIFSGAFNGTAAAGGFIGATVASAIQIGMARGVFANEAGLGSAPIAAAAAKTDSPAKQALVSMTGTFLDTFIVCTITGLV
LITTGAWKSGKTGVEATTLAFQSVFGTAGSMILGIAIILFAYSTILGWSYYGEKCVAYLFGESAVKYYKAIFIVMIAIGA
NLKLGIVWTFADIANGLMAIPNLIGLIGLSGIVVAETNRFLQAEKLKENNKKQAS

Sequences:

>Translated_455_residues
METVSKVLEQINHYVWGLPTLLLLVGTGIILTVRLKGLQFSKLLYAHKLAFKKSEDTSSSGDISHFQALMTAMAATIGMG
NIAGVATAVTIGGPGAIFWMWITALFGMATKYAEAILAVKYRVSNENGEYSGGPMYYLERGLGKKWLAVLFAIFGTTASF
GIGNMVQSNSVAEAMRINFSFPPALTGIVMSFLIAIVILGGVKKIGKVTGYVVPIKAFFYIIAGLIIIFYHYDQIPEAFS
LIFSGAFNGTAAAGGFIGATVASAIQIGMARGVFANEAGLGSAPIAAAAAKTDSPAKQALVSMTGTFLDTFIVCTITGLV
LITTGAWKSGKTGVEATTLAFQSVFGTAGSMILGIAIILFAYSTILGWSYYGEKCVAYLFGESAVKYYKAIFIVMIAIGA
NLKLGIVWTFADIANGLMAIPNLIGLIGLSGIVVAETNRFLQAEKLKENNKKQAS
>Mature_455_residues
METVSKVLEQINHYVWGLPTLLLLVGTGIILTVRLKGLQFSKLLYAHKLAFKKSEDTSSSGDISHFQALMTAMAATIGMG
NIAGVATAVTIGGPGAIFWMWITALFGMATKYAEAILAVKYRVSNENGEYSGGPMYYLERGLGKKWLAVLFAIFGTTASF
GIGNMVQSNSVAEAMRINFSFPPALTGIVMSFLIAIVILGGVKKIGKVTGYVVPIKAFFYIIAGLIIIFYHYDQIPEAFS
LIFSGAFNGTAAAGGFIGATVASAIQIGMARGVFANEAGLGSAPIAAAAAKTDSPAKQALVSMTGTFLDTFIVCTITGLV
LITTGAWKSGKTGVEATTLAFQSVFGTAGSMILGIAIILFAYSTILGWSYYGEKCVAYLFGESAVKYYKAIFIVMIAIGA
NLKLGIVWTFADIANGLMAIPNLIGLIGLSGIVVAETNRFLQAEKLKENNKKQAS

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=452, Percent_Identity=36.7256637168142, Blast_Score=254, Evalue=8e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48092; Mature: 48092

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVSKVLEQINHYVWGLPTLLLLVGTGIILTVRLKGLQFSKLLYAHKLAFKKSEDTSSS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCC
GDISHFQALMTAMAATIGMGNIAGVATAVTIGGPGAIFWMWITALFGMATKYAEAILAVK
CCHHHHHHHHHHHHHHHCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHE
YRVSNENGEYSGGPMYYLERGLGKKWLAVLFAIFGTTASFGIGNMVQSNSVAEAMRINFS
EEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCHHHCCHHHHHHEECCC
FPPALTGIVMSFLIAIVILGGVKKIGKVTGYVVPIKAFFYIIAGLIIIFYHYDQIPEAFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIFSGAFNGTAAAGGFIGATVASAIQIGMARGVFANEAGLGSAPIAAAAAKTDSPAKQAL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHH
VSMTGTFLDTFIVCTITGLVLITTGAWKSGKTGVEATTLAFQSVFGTAGSMILGIAIILF
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH
AYSTILGWSYYGEKCVAYLFGESAVKYYKAIFIVMIAIGANLKLGIVWTFADIANGLMAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHH
PNLIGLIGLSGIVVAETNRFLQAEKLKENNKKQAS
HHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
METVSKVLEQINHYVWGLPTLLLLVGTGIILTVRLKGLQFSKLLYAHKLAFKKSEDTSSS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCC
GDISHFQALMTAMAATIGMGNIAGVATAVTIGGPGAIFWMWITALFGMATKYAEAILAVK
CCHHHHHHHHHHHHHHHCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHE
YRVSNENGEYSGGPMYYLERGLGKKWLAVLFAIFGTTASFGIGNMVQSNSVAEAMRINFS
EEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCHHHCCHHHHHHEECCC
FPPALTGIVMSFLIAIVILGGVKKIGKVTGYVVPIKAFFYIIAGLIIIFYHYDQIPEAFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIFSGAFNGTAAAGGFIGATVASAIQIGMARGVFANEAGLGSAPIAAAAAKTDSPAKQAL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHH
VSMTGTFLDTFIVCTITGLVLITTGAWKSGKTGVEATTLAFQSVFGTAGSMILGIAIILF
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH
AYSTILGWSYYGEKCVAYLFGESAVKYYKAIFIVMIAIGANLKLGIVWTFADIANGLMAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHH
PNLIGLIGLSGIVVAETNRFLQAEKLKENNKKQAS
HHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]