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The map label for this gene is gerPF [H]

Identifier: 222095925

GI number: 222095925

Start: 2229247

End: 2229486

Strand: Reverse

Name: gerPF [H]

Synonym: BCQ_2265

Alternate gene names: 222095925

Gene position: 2229486-2229247 (Counterclockwise)

Preceding gene: 222095938

Following gene: 222095912

Centisome position: 42.76

GC content: 37.08

Gene sequence:

>240_bases
ATGATTGTAAAGTGGGTGAGAACTATGCCCTCAGTTGTAGGGAATTTAGTTGTACAAAATAGTAACGGTTCATTTAATTT
AGGTGATTTCTATAACGTTTCTCCAAAAGAAAACACGAAGGCTTATAATGGATCTGGTGCTTCCAACGTTGGTTTTGTTG
TTAATACTTTTAATGGTGTGAGTGCGACTAATACGTTTGATTCTGACCTTGCGGATCAAAACCAAGTCGGTACAGCTTAA

Upstream 100 bases:

>100_bases
TTTTATTATAGGATTAAGCTACACTTCAAACGTTTTATTATTCCGCAATTTTCGTTAGATGAACCCTTTGGACTATAAGA
CCATATAGTAGTGTTAACAA

Downstream 100 bases:

>100_bases
CCCTATTTTTTCATCGTTCTGTTTAAGAATTTTTAATTTGTCCATACTATAATCAGGCTGTTATACAGCTATTGTTGATT
TTTGGAGTACCCTATCTTTT

Product: spore germination protein pf

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MIVKWVRTMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDLADQNQVGTA

Sequences:

>Translated_79_residues
MIVKWVRTMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDLADQNQVGTA
>Mature_79_residues
MIVKWVRTMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDLADQNQVGTA

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerPA/gerPF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019618 [H]

Pfam domain/function: PF10676 gerPA [H]

EC number: NA

Molecular weight: Translated: 8364; Mature: 8364

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKWVRTMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGV
CCCHHHHHHHHHHCEEEEECCCCCEECCCCEECCCCCCCCEECCCCCCCCCEEEECCCCC
SATNTFDSDLADQNQVGTA
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIVKWVRTMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGV
CCCHHHHHHHHHHCEEEEECCCCCEECCCCEECCCCCCCCEECCCCCCCCCEEEECCCCC
SATNTFDSDLADQNQVGTA
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]