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The map label for this gene is ssb [H]

Identifier: 222095799

GI number: 222095799

Start: 2108142

End: 2108477

Strand: Direct

Name: ssb [H]

Synonym: BCQ_2139

Alternate gene names: 222095799

Gene position: 2108142-2108477 (Clockwise)

Preceding gene: 222095798

Following gene: 222095802

Centisome position: 40.43

GC content: 40.48

Gene sequence:

>336_bases
ATGATGAATCGAGTTGTATTAATCGGTAGATTGACAAAGGAGCCAGAATTATACTACACAAAGCAAGGCGTCGCGTATGC
ACGAGCATGTGTTGCGGTGAATAGAGGATTTCGAAATAGTTTAGGTGAACAACAAGTAGATTTTATTAATTGTGTCGTAT
GGCGAAAATCGGCTGAGAATGTAACTGAATATTGTAAGAAGGGCTCACTTGTTGGGATTACAGGGCGTATTCAGACGAGT
AATTACGATGATGAACAAGGCAAGAGAATATATAGAACTGAAGTTGTGATTGAGAGTATAACCTTTTTGGAGAGAAGGCG
GGAGGGGGCATCGTAA

Upstream 100 bases:

>100_bases
AAAAATAATCTTTTTTACTTTAAAATATATTATTTTACGCTTTTTACCCTTCATACATTTTTATTTACAATGAAGAAAAA
TATGTGAGGTGGTATAACTT

Downstream 100 bases:

>100_bases
TAAGAGGGTCTAGTAACATAGCCCTCTATCACTTTTGATTAATACCTTCCCAAACAACATCTAATTGTTGATTGAGAATA
TTTTTCGCAATGATTTCATT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB 3; Helix-destabilizing protein 3 [H]

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MMNRVVLIGRLTKEPELYYTKQGVAYARACVAVNRGFRNSLGEQQVDFINCVVWRKSAENVTEYCKKGSLVGITGRIQTS
NYDDEQGKRIYRTEVVIESITFLERRREGAS

Sequences:

>Translated_111_residues
MMNRVVLIGRLTKEPELYYTKQGVAYARACVAVNRGFRNSLGEQQVDFINCVVWRKSAENVTEYCKKGSLVGITGRIQTS
NYDDEQGKRIYRTEVVIESITFLERRREGAS
>Mature_111_residues
MMNRVVLIGRLTKEPELYYTKQGVAYARACVAVNRGFRNSLGEQQVDFINCVVWRKSAENVTEYCKKGSLVGITGRIQTS
NYDDEQGKRIYRTEVVIESITFLERRREGAS

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=99, Percent_Identity=36.3636363636364, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 12730; Mature: 12730

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRVVLIGRLTKEPELYYTKQGVAYARACVAVNRGFRNSLGEQQVDFINCVVWRKSAEN
CCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHEECCCHHH
VTEYCKKGSLVGITGRIQTSNYDDEQGKRIYRTEVVIESITFLERRREGAS
HHHHHHCCCEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMNRVVLIGRLTKEPELYYTKQGVAYARACVAVNRGFRNSLGEQQVDFINCVVWRKSAEN
CCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHEECCCHHH
VTEYCKKGSLVGITGRIQTSNYDDEQGKRIYRTEVVIESITFLERRREGAS
HHHHHHCCCEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]