Click here to switch to the map view.

The map label for this gene is cobC [C]

Identifier: 222095689

GI number: 222095689

Start: 2008815

End: 2009297

Strand: Direct

Name: cobC [C]

Synonym: BCQ_2029

Alternate gene names: 222095689

Gene position: 2008815-2009297 (Clockwise)

Preceding gene: 222095688

Following gene: 222095691

Centisome position: 38.53

GC content: 36.23

Gene sequence:

>483_bases
ATGAAAGATTTATCTATTCATGCGATCTATAGTAGTCCGAGTGAAAGAACCCTTCATACTGCAGAGTTAATAAAGGGAGA
ACGTGATATACCGATAATCGCGGATGAGCATTTCTATGAAATTAGCATGGGTATATGGGAAGGACAGACAATTGATGATA
TAGAAAGGCAATACCCAGACGACATACAGTTATTTTGGTATGAACCACATCTTTTTCAGTCAACATCAGGAGAAAATTTT
GAGGCTGTTCATAAAAGGGTAATTGAGGGGATGCAGCTTCTTTTGGAAAAGCATAAAGGAGAAAGTATATTAATTGTCAC
CCATGCGGCAGCAGCAAAATTACTTGTAGGACATTTTGCGGGTATTGAAATAGAAAATGTGTGGAATGATCCATTTATGC
ATAGTGCTAGTCTCAGTATAATAGAATTTGAAGATGGTAAAGGTGAAGTGAAGCAATTTGCAGATATAAGTCATTTTCAA
TAA

Upstream 100 bases:

>100_bases
TGGTGAAACGGAATGGAATGTAGCGAAGCGAATGCAAGGACGAAAAAATTCTGCTTTAACTGAAAATGGTATACTGCAAG
CTAAGCAATTAGGAGAGCGA

Downstream 100 bases:

>100_bases
AGCGGGATAAACGTAAAAAAGGCCGCAAAACGGCCTTTTTTTGTAGGCATAAAAACTAACAATTACGTTTTTTATACCAG
AAGTGATCAAATTTCTTGTG

Product: phosphatase phoe

Products: 3-phospho-D-glycerate

Alternate protein names: Phosphoglycerate Mutase Family Protein; Alpha-Ribazole Phosphatase; Bifunctional RNAse H/Acid Phosphatase; Phosphoglycerate/Bisphosphoglycerate Mutase; Fructose-2 6-Bisphosphatase; Phosphatase PhoE; Ribonuclease; Phosphatase; Phosphoglycerate Mutase Domain Protein; Alpha-Ribazole-5-Phosphate Phosphatase; 7 Alpha-Ribazole-5-Phosphate Phosphatase; Phosphoglycerate Mutase/Fructose-2 6-Bisphosphatase; Ribonuclease HI; Phosphoglycerate Mutase GpmB; Fructose-2 6-Bisphosphatase-Like Protein; Phosphoglycerate Mutase Family

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKDLSIHAIYSSPSERTLHTAELIKGERDIPIIADEHFYEISMGIWEGQTIDDIERQYPDDIQLFWYEPHLFQSTSGENF
EAVHKRVIEGMQLLLEKHKGESILIVTHAAAAKLLVGHFAGIEIENVWNDPFMHSASLSIIEFEDGKGEVKQFADISHFQ

Sequences:

>Translated_160_residues
MKDLSIHAIYSSPSERTLHTAELIKGERDIPIIADEHFYEISMGIWEGQTIDDIERQYPDDIQLFWYEPHLFQSTSGENF
EAVHKRVIEGMQLLLEKHKGESILIVTHAAAAKLLVGHFAGIEIENVWNDPFMHSASLSIIEFEDGKGEVKQFADISHFQ
>Mature_160_residues
MKDLSIHAIYSSPSERTLHTAELIKGERDIPIIADEHFYEISMGIWEGQTIDDIERQYPDDIQLFWYEPHLFQSTSGENF
EAVHKRVIEGMQLLLEKHKGESILIVTHAAAAKLLVGHFAGIEIENVWNDPFMHSASLSIIEFEDGKGEVKQFADISHFQ

Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.2.1

Molecular weight: Translated: 18306; Mature: 18306

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLSIHAIYSSPSERTLHTAELIKGERDIPIIADEHFYEISMGIWEGQTIDDIERQYPD
CCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEECCCEEEEEECEECCCCHHHHHHHCCC
DIQLFWYEPHLFQSTSGENFEAVHKRVIEGMQLLLEKHKGESILIVTHAAAAKLLVGHFA
CEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHC
GIEIENVWNDPFMHSASLSIIEFEDGKGEVKQFADISHFQ
CEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCC
>Mature Secondary Structure
MKDLSIHAIYSSPSERTLHTAELIKGERDIPIIADEHFYEISMGIWEGQTIDDIERQYPD
CCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEECCCEEEEEECEECCCCHHHHHHHCCC
DIQLFWYEPHLFQSTSGENFEAVHKRVIEGMQLLLEKHKGESILIVTHAAAAKLLVGHFA
CEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHC
GIEIENVWNDPFMHSASLSIIEFEDGKGEVKQFADISHFQ
CEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-phospho-D-glycerate

Specific reaction: 2-phospho-D-glycerate = 3-phospho-D-glycerate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA