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The map label for this gene is yjiA [H]

Identifier: 222095678

GI number: 222095678

Start: 1999442

End: 2000392

Strand: Direct

Name: yjiA [H]

Synonym: BCQ_2018

Alternate gene names: 222095678

Gene position: 1999442-2000392 (Clockwise)

Preceding gene: 222095676

Following gene: 222095681

Centisome position: 38.35

GC content: 34.6

Gene sequence:

>951_bases
ATGATTCCAGTAACAATATTAACTGGTTTTCTTGGATCAGGGAAAACGACATTATTAAATCGCATTTTATCAGAGAATCA
CGGTCAGAAATTGGCGGTGATCGTAAATGAAATCGGGCAAATTGGTATTGATAATCAGTTGATTATGAATGTTGAAGAAG
AAATTATGGAAATGACAAACGGCTGTTTATGCTGTACTGTACGTGAGGATTTACTCGTTGCGTTAAAACAATTACTGGAC
GTAAAAGCAGAAGGGAAAATGGACTTTGATGGATTAGTAATTGAAACGACGGGTCTTGCAAATCCAGGTCCTATTATTCA
AACATTCTTTTTAGATCCTGTTATTCAATCTGCATACCAAATTAATGGTGTTGTAACAGTAGTAGATAGTTATCATATAC
ATAAACATTTTGAAAAAGGGCTAGAAGCAAAAGAACAAATTGCATTTGCTGATGTTGTATTAGTGAATAAGTTAGATTTA
ATTGAAGAGAGTGAAAAAGAAAATCTCTTACATGAATTGCAAGGAATAAACCCGACTGCAAAGTTAATTCAGTCGACTAA
TTGTGATGTGGATATTCCATCGTTACTACAAATTCAAACGTTTAAAACGAAAGATACGTTACAAATTTATCCTCATACAG
AGCATAATCATTTAGAAGGTGTAAAATCGTTTGTACTACGCGAAGAGCGTCCGTTAGATTTACAAAAACTAAATGAGTGG
ATGTCAGCTGTCGTTCAAGAACTAGGAGAATATTTATATCGCTACAAAGGAATTTTATCGATTGATGGAGTGGATAAACG
TATCGTTTTCCAAGGCGTACATACGTTATTTGCTGCTTCGTATGATAGAGAGTGGCAAGAGGGCGAAGATCGAGTAAGTG
AAGTTGTTTTTATCGGAAAAGATATTAATAAAGAATGGTTCCAAGCACATTTCGAGGAGTGTGTGAAATAA

Upstream 100 bases:

>100_bases
AGTTACAGTGTCGTACATACAATAAATATGTTTTGCTACAAAAACGATTTTTTCTATATGCTATAATGTAGAAACATATA
GCTATAAGGAGAGGTACAAA

Downstream 100 bases:

>100_bases
GTCTGCGTTTATTGCAGGCTTATTTTTTGGACTTAACTAAGTGTTTTGTAGAAAAATACTAGATTGCCAAAAACGAAGGA
CTAAAAAAACCTGTTTTCAC

Product: cobalamin synthesis protein/p47k family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MIPVTILTGFLGSGKTTLLNRILSENHGQKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQLLD
VKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVVLVNKLDL
IEESEKENLLHELQGINPTAKLIQSTNCDVDIPSLLQIQTFKTKDTLQIYPHTEHNHLEGVKSFVLREERPLDLQKLNEW
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECVK

Sequences:

>Translated_316_residues
MIPVTILTGFLGSGKTTLLNRILSENHGQKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQLLD
VKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVVLVNKLDL
IEESEKENLLHELQGINPTAKLIQSTNCDVDIPSLLQIQTFKTKDTLQIYPHTEHNHLEGVKSFVLREERPLDLQKLNEW
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECVK
>Mature_316_residues
MIPVTILTGFLGSGKTTLLNRILSENHGQKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQLLD
VKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVVLVNKLDL
IEESEKENLLHELQGINPTAKLIQSTNCDVDIPSLLQIQTFKTKDTLQIYPHTEHNHLEGVKSFVLREERPLDLQKLNEW
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECVK

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI148727351, Length=340, Percent_Identity=32.0588235294118, Blast_Score=174, Evalue=7e-44,
Organism=Homo sapiens, GI33469141, Length=340, Percent_Identity=31.7647058823529, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI146231952, Length=336, Percent_Identity=31.8452380952381, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI126722884, Length=340, Percent_Identity=31.7647058823529, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI223941779, Length=334, Percent_Identity=31.7365269461078, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI223941776, Length=330, Percent_Identity=30.3030303030303, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI119120938, Length=320, Percent_Identity=31.25, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI310124603, Length=222, Percent_Identity=25.2252252252252, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI87082430, Length=314, Percent_Identity=40.7643312101911, Blast_Score=214, Evalue=7e-57,
Organism=Escherichia coli, GI1788499, Length=193, Percent_Identity=31.6062176165803, Blast_Score=87, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6324356, Length=357, Percent_Identity=30.2521008403361, Blast_Score=125, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 35780; Mature: 35780

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVTILTGFLGSGKTTLLNRILSENHGQKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTN
CCCHHEEHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQ
CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
INGVVTVVDSYHIHKHFEKGLEAKEQIAFADVVLVNKLDLIEESEKENLLHELQGINPTA
HCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KLIQSTNCDVDIPSLLQIQTFKTKDTLQIYPHTEHNHLEGVKSFVLREERPLDLQKLNEW
HHHHCCCCCCCCCCHHEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGK
HHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECC
DINKEWFQAHFEECVK
CCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIPVTILTGFLGSGKTTLLNRILSENHGQKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTN
CCCHHEEHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQ
CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
INGVVTVVDSYHIHKHFEKGLEAKEQIAFADVVLVNKLDLIEESEKENLLHELQGINPTA
HCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KLIQSTNCDVDIPSLLQIQTFKTKDTLQIYPHTEHNHLEGVKSFVLREERPLDLQKLNEW
HHHHCCCCCCCCCCHHEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
MSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGK
HHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECC
DINKEWFQAHFEECVK
CCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]