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The map label for this gene is yisU [H]

Identifier: 222095630

GI number: 222095630

Start: 1949611

End: 1950225

Strand: Reverse

Name: yisU [H]

Synonym: BCQ_1970

Alternate gene names: 222095630

Gene position: 1950225-1949611 (Counterclockwise)

Preceding gene: 222095633

Following gene: 222095614

Centisome position: 37.4

GC content: 35.12

Gene sequence:

>615_bases
ATGAGTGAAGCAATTATTCATGGTATCATTCTTGCATTTGGTCTTATCATTCCATTAGGCGTCCAAAATGTTTTCGTCTT
TAACCAAGGTGCGAGCCAACCAAACATTTGGAGGGCAGCCCCTGTCGTATTAACTGCCTCTATATGTGATACGTTACTCA
TATTGATAGCGGTACAAGGTGTTTCCCTTGTACTCCTTACTTTTTCTTGGCTAACTAACTCGTTATATATAATTGGATTT
TTCTTTCTCCTATACATGGGCTTTGTTATTTGGAGAAGTACCCCTTCCAACGATGTAAAACAAGAAAAAAGTATGCCAGT
AAAAAAACAAATACTTTTCGCTGCATCGGTTTCATTATTAAATCCACATGCAATTTTAGATACAATCGGTGTAATTGGAA
CAAATTCGATTCAATACATAGGAAATGAAAAATGGGCTTTCACACTTGCAACTATTATCGTTTCTTGGATTTGGTTTATA
AGCTTAGCTTTAGCGGGGAAATTTCTAAAAAGGCTAGACTCAACCGGAAAGACAATCGTATTATTAAATAAATTTTCTGG
TCTCATCATATGGAGTGTCGCACTTTATATGTTAAAACAAGTTATTTATTCCTAA

Upstream 100 bases:

>100_bases
TTTTGGTTGGTAACCTCCCCAACCATATGGATGGATACAAATTTTCATTTCTTCTATACAATATACACTATCATAATAAA
TTTAAATAGGAGGAAATATG

Downstream 100 bases:

>100_bases
TGAACGAAAGAGAATTGCATGTTACTGAAAACATCATGCAATTCTCTTACAAATTATGAAGTAGGTTCTGGTTTCTTTTT
TACGTTCTTTGCATCTTTTG

Product: lyse/ygga family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSEAIIHGIILAFGLIIPLGVQNVFVFNQGASQPNIWRAAPVVLTASICDTLLILIAVQGVSLVLLTFSWLTNSLYIIGF
FFLLYMGFVIWRSTPSNDVKQEKSMPVKKQILFAASVSLLNPHAILDTIGVIGTNSIQYIGNEKWAFTLATIIVSWIWFI
SLALAGKFLKRLDSTGKTIVLLNKFSGLIIWSVALYMLKQVIYS

Sequences:

>Translated_204_residues
MSEAIIHGIILAFGLIIPLGVQNVFVFNQGASQPNIWRAAPVVLTASICDTLLILIAVQGVSLVLLTFSWLTNSLYIIGF
FFLLYMGFVIWRSTPSNDVKQEKSMPVKKQILFAASVSLLNPHAILDTIGVIGTNSIQYIGNEKWAFTLATIIVSWIWFI
SLALAGKFLKRLDSTGKTIVLLNKFSGLIIWSVALYMLKQVIYS
>Mature_203_residues
SEAIIHGIILAFGLIIPLGVQNVFVFNQGASQPNIWRAAPVVLTASICDTLLILIAVQGVSLVLLTFSWLTNSLYIIGFF
FLLYMGFVIWRSTPSNDVKQEKSMPVKKQILFAASVSLLNPHAILDTIGVIGTNSIQYIGNEKWAFTLATIIVSWIWFIS
LALAGKFLKRLDSTGKTIVLLNKFSGLIIWSVALYMLKQVIYS

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=201, Percent_Identity=32.8358208955224, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22582; Mature: 22451

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAIIHGIILAFGLIIPLGVQNVFVFNQGASQPNIWRAAPVVLTASICDTLLILIAVQG
CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
VSLVLLTFSWLTNSLYIIGFFFLLYMGFVIWRSTPSNDVKQEKSMPVKKQILFAASVSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHC
NPHAILDTIGVIGTNSIQYIGNEKWAFTLATIIVSWIWFISLALAGKFLKRLDSTGKTIV
CHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LLNKFSGLIIWSVALYMLKQVIYS
EEECCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEAIIHGIILAFGLIIPLGVQNVFVFNQGASQPNIWRAAPVVLTASICDTLLILIAVQG
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
VSLVLLTFSWLTNSLYIIGFFFLLYMGFVIWRSTPSNDVKQEKSMPVKKQILFAASVSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHC
NPHAILDTIGVIGTNSIQYIGNEKWAFTLATIIVSWIWFISLALAGKFLKRLDSTGKTIV
CHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LLNKFSGLIIWSVALYMLKQVIYS
EEECCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]