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The map label for this gene is oppA [H]

Identifier: 222095498

GI number: 222095498

Start: 1811198

End: 1812838

Strand: Reverse

Name: oppA [H]

Synonym: BCQ_1838

Alternate gene names: 222095498

Gene position: 1812838-1811198 (Counterclockwise)

Preceding gene: 222095503

Following gene: 222095495

Centisome position: 34.77

GC content: 34.31

Gene sequence:

>1641_bases
ATGAAGAAAAAAACAAAGGGAATCGTTGCACTCTCAATCACATTATCTATGTTTTTAACAGCATGTGGTCAAAAACAAGA
GGCAACAACTACCGGAGAGAAGAAAAAAGAATCTTCGAAACAAGTATTAAACATTGTAGAAGCTGGGGAAATTTCTACAC
TTGATTCATCTATCGCAACCGATGGGTTTTCTTACGCTGCATTAAACAACGTAATGGAAGGATTATATATGCCTGGTCCT
GACAATAAACCTGTTCCTGCAGCAGCTGAATCATACAAACTGAGCGAAGACGGAAAAACATATACATTTACATTACACGA
TTCAAAATGGTCAAATGGCGATCCAGTAACTGCCCATGATTTTGAATATGCATGGAAACGGGCCGTTAATCCAGAAACTG
CTTCTGAATACGCACATATTATGTTCGATATTAAAAACGCTGAAAAAATAAATAAAAAAGAATTGCCAATTGATTCATTT
GGTGTAAAGGCGATTGATAATAAAACTCTTGAAGTACAGTTAGAACACCCTGTTCCATACTTTTTAGGTTTAATGGGATT
TGCAACATTTTATCCTCAAAACAAAAAGGTTGTAGAAGCACAAGGGAAAAATTACGGACTTGAAGCTGCAAATGTAGTTT
ATAACGGACCTTTCCAATTAAGTGAATGGAAACATGATACAAGTTATAAAATGACAAAAAACCCGAACTACTGGGATAAT
AAAAATGTGAAATTAAATGAAATTAATGTAAATATCGTAAAAGATACTTCAACAGCCGTTAATTTATTTGAAAGTAAACA
AGTAGACCGTATTACGATCAATTCAGAGTTTGTTGATAAATATCAAAAAGATCCGAGCTTAAAGAAAATGGAACGTCCTT
CTGTGACATTTTTCCGATTTAGTCAAAAGAACCCTTTATTAGCAAACAAAAATGCTCGTAAAGCTATTTCGCTTGCTTTT
GATAAACAAGGAATCGCAACAACGATTTTAAACAATGGTTCTATACCTGCGAATGCATTCGTTCCAAAAGGATTCGTAAA
AGGACCTGACAATAAAGATTTTCGCAGTACAAGTCATGTAAAAGTAGAAACAAATGTGAAAGAAGCTAAAACACTATGGG
AAACTGCGAAAAAAGAAACAAATTTACAAAACGCTTCTCTTTCAATCATAACAACTGATGAATCTAACGATAAAAAAATT
AGTGAGTTTTTAAAAGGTGAACTGGAGAAAAACTTACCTGGATTAAAAATCACATTACAATCACTTCCAGTAAAAGCATT
TTTAGATCGTGAAGGAAATGGTGATTTTGAAATTTCACTTTCTACATGGGGACCAGATTATCCTGATCCTACAACATTTT
TAAATATGTTCGTCACAGACGGACCGTTTAATAAGATGAGTTACTCAAACAAACAATACGACGAATTAATTGAGAAAACG
AGCTCTACTTTAGTAACTGACTTACCAGCACGTTGGAAAGCGTTCCAAGATGCAGAGAAAATCTTACTTGAAGATGATGC
AGCTATCGCTCCAATCTTCCAATCAGGACTTGTATATTTAGAACGTCCAACAGTAAAAGGTGTTGTTGTTCGTCCATTTG
CAGGAATTTATTCTTATAAGTGGGCCTCTATTACGGAATAA

Upstream 100 bases:

>100_bases
AAATAATATATTTTTTCTATATGCTTTATCGGATTTATTTATAGAAATTTTCTATATTTTCTTTTATACTAAGGCAGAGA
TGAAGGAAAGGATGACAACT

Downstream 100 bases:

>100_bases
GAAAAAGGCGATCCTAAAACATATTAGGATCGCCTTCTTTATTAAATTGCAAAACGCTTATACTTTTCGTAATCGCTCGT
CTTACATTCCACTTCTAGTT

Product: oligopeptide ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MKKKTKGIVALSITLSMFLTACGQKQEATTTGEKKKESSKQVLNIVEAGEISTLDSSIATDGFSYAALNNVMEGLYMPGP
DNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSF
GVKAIDNKTLEVQLEHPVPYFLGLMGFATFYPQNKKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRFSQKNPLLANKNARKAISLAF
DKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHVKVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKI
SEFLKGELEKNLPGLKITLQSLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
SSTLVTDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVVRPFAGIYSYKWASITE

Sequences:

>Translated_546_residues
MKKKTKGIVALSITLSMFLTACGQKQEATTTGEKKKESSKQVLNIVEAGEISTLDSSIATDGFSYAALNNVMEGLYMPGP
DNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSF
GVKAIDNKTLEVQLEHPVPYFLGLMGFATFYPQNKKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRFSQKNPLLANKNARKAISLAF
DKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHVKVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKI
SEFLKGELEKNLPGLKITLQSLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
SSTLVTDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVVRPFAGIYSYKWASITE
>Mature_546_residues
MKKKTKGIVALSITLSMFLTACGQKQEATTTGEKKKESSKQVLNIVEAGEISTLDSSIATDGFSYAALNNVMEGLYMPGP
DNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSF
GVKAIDNKTLEVQLEHPVPYFLGLMGFATFYPQNKKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRFSQKNPLLANKNARKAISLAF
DKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHVKVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKI
SEFLKGELEKNLPGLKITLQSLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
SSTLVTDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVVRPFAGIYSYKWASITE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789397, Length=499, Percent_Identity=28.8577154308617, Blast_Score=207, Evalue=2e-54,
Organism=Escherichia coli, GI1787495, Length=520, Percent_Identity=28.8461538461538, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI87081878, Length=528, Percent_Identity=28.7878787878788, Blast_Score=189, Evalue=5e-49,
Organism=Escherichia coli, GI1787762, Length=456, Percent_Identity=26.3157894736842, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1789966, Length=469, Percent_Identity=23.0277185501066, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1787551, Length=530, Percent_Identity=21.8867924528302, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787052, Length=552, Percent_Identity=23.1884057971014, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789887, Length=509, Percent_Identity=24.1650294695481, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61115; Mature: 61115

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKTKGIVALSITLSMFLTACGQKQEATTTGEKKKESSKQVLNIVEAGEISTLDSSIAT
CCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHC
DGFSYAALNNVMEGLYMPGPDNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCEEECCCCCEEEEEEECCCCCCCCCCEECC
FEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSFGVKAIDNKTLEVQLEHPVPY
HHHHHHHCCCCCHHHCEEEEEEEECCCHHCCHHCCCCCCCCCEEECCCEEEEEECCCCHH
FLGLMGFATFYPQNKKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCEECCCCCCCCCEEECCCCCCCCC
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRF
CCEEEEEEEEEEEECCCHHHHHHHCCCCCEEEECHHHHHHHHCCCCHHHHCCCCEEEEEE
SQKNPLLANKNARKAISLAFDKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHV
CCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
KVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKISEFLKGELEKNLPGLKITLQ
EEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEE
SLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
CCCEEEEECCCCCCCEEEEEECCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHH
SSTLVTDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVVRPFAGIYSYK
HCCEEECCCHHHHHHHHHHHHEECCCCCCHHHHHCCEEEEECCCCCCEEECCCCCHHEEC
WASITE
CCCCCC
>Mature Secondary Structure
MKKKTKGIVALSITLSMFLTACGQKQEATTTGEKKKESSKQVLNIVEAGEISTLDSSIAT
CCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHC
DGFSYAALNNVMEGLYMPGPDNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCEEECCCCCEEEEEEECCCCCCCCCCEECC
FEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSFGVKAIDNKTLEVQLEHPVPY
HHHHHHHCCCCCHHHCEEEEEEEECCCHHCCHHCCCCCCCCCEEECCCEEEEEECCCCHH
FLGLMGFATFYPQNKKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCEECCCCCCCCCEEECCCCCCCCC
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRF
CCEEEEEEEEEEEECCCHHHHHHHCCCCCEEEECHHHHHHHHCCCCHHHHCCCCEEEEEE
SQKNPLLANKNARKAISLAFDKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHV
CCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
KVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKISEFLKGELEKNLPGLKITLQ
EEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEE
SLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
CCCEEEEECCCCCCCEEEEEECCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHH
SSTLVTDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVVRPFAGIYSYK
HCCEEECCCHHHHHHHHHHHHEECCCCCCHHHHHCCEEEEECCCCCCEEECCCCCHHEEC
WASITE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]