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The map label for this gene is fliF [H]

Identifier: 222095370

GI number: 222095370

Start: 1681287

End: 1682861

Strand: Direct

Name: fliF [H]

Synonym: BCQ_1710

Alternate gene names: 222095370

Gene position: 1681287-1682861 (Clockwise)

Preceding gene: 222095369

Following gene: 222095371

Centisome position: 32.24

GC content: 37.65

Gene sequence:

>1575_bases
ATGGAAAAGTTAAAAAATGTTTTCCAATCGTTAAAAACGTGGCATAAGTTAGTCATTGGTGCTGCGCTTTTAGCAATTGT
AACAGGAGCACTTTTATACTTCACCTTGCCAGATAAATATGTTGTTGTATATCAAAATTTAAATGATGCAGACAAGCAAG
AGATTACAGCAGAATTATCGAAGCTAGGTGTCGATTACCAATTAGCAGCCGATGGTTCGATTCGTGTGCAAAAGAATGAT
GCTCCATGGGTTCGAAAAGAAATGAATGGAATGGGCTTACCGTTTAACTCAAAAAGCGGTGAGGAAATTTTATTAGAAAG
CTCGCTCGGTTCAAGTGAGCAAGATAAAAAAATGAAGCAAATTGTCGGTACGAAAAAGCAATTAGAGCAAGACATTGTAA
GAAACTTTGCGACAGTTGAAACGGCAAATGTTCAAATTACATTACCTGAAAAAGAAACAATTTTTGATGAAGAAAAAGCA
AAAGGAACAGCCGCAATTACGGTTGGTGTAAAGCGTGGTCAACTATTAACGGCTGATCAAGTTGCTGGTATACAGCAAAT
GATCAGTGCAGCAGTTCCTGGTGTAAAAGCAGAAGAAGTAAGTGTGATTGATAGTAAAAAAGGTGTTATCTCAAAAGGGG
CAGATGAAGCACATGCTACTAGTTCCTCTTCTTATGAGAAAGAAGTAGAGATGCAGCACCAAATTGAAGGTAAATTAAAG
CAAGATATCGATGCAACATTAATGACGATGTTTAAGCCGAATGAATATAAAGTGAATACGAAAGTATCTGTAAACTACGA
TGAAGTTACACGTCAGTCTGAAAAATATGGTGATAAAGGTGTACTTCGTAGTAAACAAGAGCAAGAAGAAACCTCTACTG
CGCAAGAAGGTGCAGATACGAAGCAAGGCGCTGGTATTACAGCGAACGGTGAAGTGCCAAATTACGGTACGAACAATAAT
CAAAATGGTAAAATCGTCTACGATAATAAAAATGGCAACAAAATCGAAAACTATGAAATAGATAAAACAGTTGAAACGAT
TAAGAAACACCCAGAGTTAACGAAAACAAATGTTGTTGTATGGGTAGATAATGATACGTTAGTAAAACGAAGAATTGATA
TGACAACTTTCAAAGAAGCGATCGGCACAGCTGCTGGGCTTCAAGCTGACCCGAATGGAAACTTTACAAATGGTCAAGTT
AACGTTGTAACTGTTCAGTTTGATCAGCCGAAAGAAGAGAAGAAGAAAGAGCCAGAAGAAAGTGGTATAAACTGGTGGTT
ATTCGGTGGTATTACAGGTGGCTTATTAGCGCTCTTTGGTCTAATATGGTTCTTCTTAGCAAGACGTAAGAGAAAGAAAG
AAGAAGAGGAATATGAAGAATACTTAGCAGAAGAGGAAGTTGCTGCAAGTAGTGAAAGTATTATGGAAATTCCGGAAGAG
AAAATAGTACCAGAGCCAAAACCTGAGCCAGAAGAACCGAAAGAACCAACGTTAGATGAACAAGTGCAGGATGCTACGAA
AGAACATGTAGAAGGTACTGCAAAAGTAATTAAAAAATGGTTAAACGGACAGTAA

Upstream 100 bases:

>100_bases
TCTCAAATGAAAACGGCTGCTCTTGTACGTGATAATCTTATTGAAAATTATAAGTCACTAATTAATATGCAAATTTAGGA
AAATGGACGGGTGTGTTTAA

Downstream 100 bases:

>100_bases
GGGAGGAACAACGATGTTAGATGAAATCTCCTCCAAAGAAAAAGCTGCCATCCTCATTCGTACATTAAATGAAGAGGTGG
CAGCAAAAGTCATTGAATAT

Product: flagellar ms-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MEKLKNVFQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDADKQEITAELSKLGVDYQLAADGSIRVQKND
APWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQIVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKA
KGTAAITVGVKRGQLLTADQVAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHATSSSSYEKEVEMQHQIEGKLK
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEETSTAQEGADTKQGAGITANGEVPNYGTNNN
QNGKIVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVVWVDNDTLVKRRIDMTTFKEAIGTAAGLQADPNGNFTNGQV
NVVTVQFDQPKEEKKKEPEESGINWWLFGGITGGLLALFGLIWFFLARRKRKKEEEEYEEYLAEEEVAASSESIMEIPEE
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ

Sequences:

>Translated_524_residues
MEKLKNVFQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDADKQEITAELSKLGVDYQLAADGSIRVQKND
APWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQIVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKA
KGTAAITVGVKRGQLLTADQVAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHATSSSSYEKEVEMQHQIEGKLK
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEETSTAQEGADTKQGAGITANGEVPNYGTNNN
QNGKIVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVVWVDNDTLVKRRIDMTTFKEAIGTAAGLQADPNGNFTNGQV
NVVTVQFDQPKEEKKKEPEESGINWWLFGGITGGLLALFGLIWFFLARRKRKKEEEEYEEYLAEEEVAASSESIMEIPEE
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ
>Mature_524_residues
MEKLKNVFQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDADKQEITAELSKLGVDYQLAADGSIRVQKND
APWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQIVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKA
KGTAAITVGVKRGQLLTADQVAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHATSSSSYEKEVEMQHQIEGKLK
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEETSTAQEGADTKQGAGITANGEVPNYGTNNN
QNGKIVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVVWVDNDTLVKRRIDMTTFKEAIGTAAGLQADPNGNFTNGQV
NVVTVQFDQPKEEKKKEPEESGINWWLFGGITGGLLALFGLIWFFLARRKRKKEEEEYEEYLAEEEVAASSESIMEIPEE
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=373, Percent_Identity=23.0563002680965, Blast_Score=99, Evalue=8e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 58293; Mature: 58293

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLKNVFQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDADKQEITAELS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHH
KLGVDYQLAADGSIRVQKNDAPWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQ
HCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
IVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKAKGTAAITVGVKRGQLLTADQ
HHCCHHHHHHHHHHHHHHEEECEEEEEECCCHHHCCHHHCCCCEEEEEEECCCCEECHHH
VAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHATSSSSYEKEVEMQHQIEGKLK
HHHHHHHHHHHCCCCCCHHEEECCCCCCCHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHH
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEETSTAQEGADT
HHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCC
KQGAGITANGEVPNYGTNNNQNGKIVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVV
CCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEE
WVDNDTLVKRRIDMTTFKEAIGTAAGLQADPNGNFTNGQVNVVTVQFDQPKEEKKKEPEE
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCHHHHHCCCHH
SGINWWLFGGITGGLLALFGLIWFFLARRKRKKEEEEYEEYLAEEEVAASSESIMEIPEE
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCHH
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKLKNVFQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDADKQEITAELS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHH
KLGVDYQLAADGSIRVQKNDAPWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQ
HCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
IVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKAKGTAAITVGVKRGQLLTADQ
HHCCHHHHHHHHHHHHHHEEECEEEEEECCCHHHCCHHHCCCCEEEEEEECCCCEECHHH
VAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHATSSSSYEKEVEMQHQIEGKLK
HHHHHHHHHHHCCCCCCHHEEECCCCCCCHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHH
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEETSTAQEGADT
HHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCC
KQGAGITANGEVPNYGTNNNQNGKIVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVV
CCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEE
WVDNDTLVKRRIDMTTFKEAIGTAAGLQADPNGNFTNGQVNVVTVQFDQPKEEKKKEPEE
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCHHHHHCCCHH
SGINWWLFGGITGGLLALFGLIWFFLARRKRKKEEEEYEEYLAEEEVAASSESIMEIPEE
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCHH
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]