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The map label for this gene is ypeP [H]

Identifier: 222095318

GI number: 222095318

Start: 1640126

End: 1640785

Strand: Direct

Name: ypeP [H]

Synonym: BCQ_1658

Alternate gene names: 222095318

Gene position: 1640126-1640785 (Clockwise)

Preceding gene: 222095317

Following gene: 222095319

Centisome position: 31.46

GC content: 34.7

Gene sequence:

>660_bases
ATGAAATATAAAATTCATTGGTTGTATAAAACAAAACGCGGTTTTCAGACGGAATTAACGACAGATTATATGAACATAGA
AGAAGCACTTCAATTTGCGGAGGATTTCGAGAAAACAGGAAGAGTGAAAGAAGTATTATTTTACGATGAAATGGATGCAG
AATGGTCATTAAAGGAAATGAAGAAGCTGAGCAAACAAGTGGAGGAAGAACCCCAAGAAATACTCGTTTATTTTGATGGC
GGCTATGATGTACAGACGAAAGAAGCTGGTATAGGCATATGTGTATACTATAAAAAAGGAAATACAAAATACCGAATTCG
CCGTAATGCATATATAGAAGGCATATATGATAATAATGAAGCGGAATATGCATCATTACTATATAGCATGAATATACTCG
AGGAATTAGGGATTAAGTATGAAGCGGTCACGCTTCGCGGAGATTCTCAAGTTGTACTGCAGCAATTGGCTGGAGAATGG
CCTTGTTATGATGAACATTTAAATCATTATTTAGACCAAATTGAGCAAAAAGCAAAGCAAATGAAATTAAAACTTGTATG
TGAGCCTATATCAAGAAAACAAAATAAAGAAGCACATCAATTAGCTACGCAAGCATTAGAAGGAACAGTGATTGATAGTC
ATAAAGAAATAACCGAATAG

Upstream 100 bases:

>100_bases
TTGAATATAATTCTTTGACTCTTGATAAAATATAATAAAATAAAGTGAGGCTTTCATTAGCTGGATACATATAAGAAGTC
CTACATAAGGGGAATCTAGT

Downstream 100 bases:

>100_bases
AGAGGTGCAAAGGTGGATAAAAAGCAACTCATTACAGAGGTAAATGACTTATTAGAAACGTATTGTGAAGGATGTTTTTT
GCGAGAACATAATCGAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKYKIHWLYKTKRGFQTELTTDYMNIEEALQFAEDFEKTGRVKEVLFYDEMDAEWSLKEMKKLSKQVEEEPQEILVYFDG
GYDVQTKEAGIGICVYYKKGNTKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE

Sequences:

>Translated_219_residues
MKYKIHWLYKTKRGFQTELTTDYMNIEEALQFAEDFEKTGRVKEVLFYDEMDAEWSLKEMKKLSKQVEEEPQEILVYFDG
GYDVQTKEAGIGICVYYKKGNTKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE
>Mature_219_residues
MKYKIHWLYKTKRGFQTELTTDYMNIEEALQFAEDFEKTGRVKEVLFYDEMDAEWSLKEMKKLSKQVEEEPQEILVYFDG
GYDVQTKEAGIGICVYYKKGNTKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RNase H domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002156 [H]

Pfam domain/function: PF00075 RnaseH [H]

EC number: 3.1.26.4

Molecular weight: Translated: 25767; Mature: 25767

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50879 RNASE_H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKIHWLYKTKRGFQTELTTDYMNIEEALQFAEDFEKTGRVKEVLFYDEMDAEWSLKEM
CCEEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHH
KKLSKQVEEEPQEILVYFDGGYDVQTKEAGIGICVYYKKGNTKYRIRRNAYIEGIYDNNE
HHHHHHHHCCCCEEEEEECCCEEEEECCCCEEEEEEEECCCEEEEEEECCEEEEEECCCH
AEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEWPCYDEHLNHYLDQIEQKAKQ
HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE
HHHHHEECHHHHCCCHHHHHHHHHHHCCCEECCCHHCCC
>Mature Secondary Structure
MKYKIHWLYKTKRGFQTELTTDYMNIEEALQFAEDFEKTGRVKEVLFYDEMDAEWSLKEM
CCEEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHH
KKLSKQVEEEPQEILVYFDGGYDVQTKEAGIGICVYYKKGNTKYRIRRNAYIEGIYDNNE
HHHHHHHHCCCCEEEEEECCCEEEEECCCCEEEEEEEECCCEEEEEEECCEEEEEECCCH
AEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEWPCYDEHLNHYLDQIEQKAKQ
HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE
HHHHHEECHHHHCCCHHHHHHHHHHHCCCEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]