Click here to switch to the map view.

The map label for this gene is yphB [H]

Identifier: 222095231

GI number: 222095231

Start: 1544102

End: 1544995

Strand: Direct

Name: yphB [H]

Synonym: BCQ_1571

Alternate gene names: 222095231

Gene position: 1544102-1544995 (Clockwise)

Preceding gene: 222095230

Following gene: 222095232

Centisome position: 29.61

GC content: 41.39

Gene sequence:

>894_bases
ATGATTGAATATACACCGGCCATTTTATGTGGCGTAATAGCGGGGACAGTAACGAGAGTGTTAATGCTCCGGACAGATAC
GCGGCAATATCCGACGAGGCTCCACGGGAAAATTATTCATATTGCGATGGGGTTAATTGCGGCGGCTTTAGGAGCGATTG
CAATTCCGTCTATATTGAAAAAAGATTTTTCTGCCATTACGTTTCTTACGTTAGCAGCAACACAGTTTCGTGATGTGCGT
AATATGGAAAGAAATACATTGCAACAATTAGATGGTTATGAGCTTGTACCACGTGGGAATACATATATTGAAGGAATTGC
ATTAGTTTTTGAAAGTCGCAACTATTTGGCGATGTTAACGTCGTTTGTAACGACGTTTGCTTATATAGGGTTCCGTTCAT
GGATTGCTGGAGTCGTTATGGCTATCATCGCATTTTTTATCGCGAAAACATTAATGTCTGGTAAGAGGTTGCATGATCTT
GTTGATATCGAGCATGTTCCACTTCGTTTTGAAGGAGCGGGGCTATATATTGATAATATTTACATTATGAATATTGGATT
GCCAGCAAGACAAGAGGAAATTATGAAGTATGGAATGGGTTTTATTTTAAGACCGAAATCAATTGATGCGATGGTGACAA
TCTCTAACTTAGGACAACGACAAGCTATTTTACATGATGTTTCTGTTGCTTTAGGGATTTATAGAGATTCTGGTACGCCG
GCACTTGCGCCGCTAGCAAAGCGTGATCTAGAGGATGGCAGGGTTGGAATCTTTGTCTTACCACAAGATCAAGATGTGGA
GAAAGCAATAGGTGTCATAGGGAACGTGCCGACGTTAGAAAGCGCTGTTCATATGTCATCGGAAGCCCCGAAAGGAAGGG
GAGATAAGAGATGA

Upstream 100 bases:

>100_bases
TCTACATTTTTTATGGCAATTTTGTTTTGGATTGCGAAAGCATCAGTATATATGGAACAGTTCAAGAGAAAAACACGTAA
AAGAAAGGCGAGGGTAATAC

Downstream 100 bases:

>100_bases
TGTTAGAAAGTGTAATTCTTGCAGTTATTACAACGACTCCGGAGAAATTTGCTGGTGGTGCCCCTCTGTTTACTTGTGAA
TCGACAGAGGAGTTAGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MIEYTPAILCGVIAGTVTRVLMLRTDTRQYPTRLHGKIIHIAMGLIAAALGAIAIPSILKKDFSAITFLTLAATQFRDVR
NMERNTLQQLDGYELVPRGNTYIEGIALVFESRNYLAMLTSFVTTFAYIGFRSWIAGVVMAIIAFFIAKTLMSGKRLHDL
VDIEHVPLRFEGAGLYIDNIYIMNIGLPARQEEIMKYGMGFILRPKSIDAMVTISNLGQRQAILHDVSVALGIYRDSGTP
ALAPLAKRDLEDGRVGIFVLPQDQDVEKAIGVIGNVPTLESAVHMSSEAPKGRGDKR

Sequences:

>Translated_297_residues
MIEYTPAILCGVIAGTVTRVLMLRTDTRQYPTRLHGKIIHIAMGLIAAALGAIAIPSILKKDFSAITFLTLAATQFRDVR
NMERNTLQQLDGYELVPRGNTYIEGIALVFESRNYLAMLTSFVTTFAYIGFRSWIAGVVMAIIAFFIAKTLMSGKRLHDL
VDIEHVPLRFEGAGLYIDNIYIMNIGLPARQEEIMKYGMGFILRPKSIDAMVTISNLGQRQAILHDVSVALGIYRDSGTP
ALAPLAKRDLEDGRVGIFVLPQDQDVEKAIGVIGNVPTLESAVHMSSEAPKGRGDKR
>Mature_297_residues
MIEYTPAILCGVIAGTVTRVLMLRTDTRQYPTRLHGKIIHIAMGLIAAALGAIAIPSILKKDFSAITFLTLAATQFRDVR
NMERNTLQQLDGYELVPRGNTYIEGIALVFESRNYLAMLTSFVTTFAYIGFRSWIAGVVMAIIAFFIAKTLMSGKRLHDL
VDIEHVPLRFEGAGLYIDNIYIMNIGLPARQEEIMKYGMGFILRPKSIDAMVTISNLGQRQAILHDVSVALGIYRDSGTP
ALAPLAKRDLEDGRVGIFVLPQDQDVEKAIGVIGNVPTLESAVHMSSEAPKGRGDKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32711; Mature: 32711

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEYTPAILCGVIAGTVTRVLMLRTDTRQYPTRLHGKIIHIAMGLIAAALGAIAIPSILK
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDFSAITFLTLAATQFRDVRNMERNTLQQLDGYELVPRGNTYIEGIALVFESRNYLAMLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHEEEEHCCCCHHHHHH
SFVTTFAYIGFRSWIAGVVMAIIAFFIAKTLMSGKRLHDLVDIEHVPLRFEGAGLYIDNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCEEEEEE
YIMNIGLPARQEEIMKYGMGFILRPKSIDAMVTISNLGQRQAILHDVSVALGIYRDSGTP
EEEECCCCCHHHHHHHHCCCEEECCCCCCEEEEHHHCCHHHHHHHHHHHHHEEEECCCCC
ALAPLAKRDLEDGRVGIFVLPQDQDVEKAIGVIGNVPTLESAVHMSSEAPKGRGDKR
CHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIEYTPAILCGVIAGTVTRVLMLRTDTRQYPTRLHGKIIHIAMGLIAAALGAIAIPSILK
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDFSAITFLTLAATQFRDVRNMERNTLQQLDGYELVPRGNTYIEGIALVFESRNYLAMLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHEEEEHCCCCHHHHHH
SFVTTFAYIGFRSWIAGVVMAIIAFFIAKTLMSGKRLHDLVDIEHVPLRFEGAGLYIDNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCEEEEEE
YIMNIGLPARQEEIMKYGMGFILRPKSIDAMVTISNLGQRQAILHDVSVALGIYRDSGTP
EEEECCCCCHHHHHHHHCCCEEECCCCCCEEEEHHHCCHHHHHHHHHHHHHEEEECCCCC
ALAPLAKRDLEDGRVGIFVLPQDQDVEKAIGVIGNVPTLESAVHMSSEAPKGRGDKR
CHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]