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The map label for this gene is tnpR [C]

Identifier: 222095002

GI number: 222095002

Start: 1331633

End: 1331989

Strand: Direct

Name: tnpR [C]

Synonym: BCQ_1341

Alternate gene names: 222095002

Gene position: 1331633-1331989 (Clockwise)

Preceding gene: 222095000

Following gene: 222095003

Centisome position: 25.54

GC content: 31.93

Gene sequence:

>357_bases
ATGACTGTTACGAAGTTAGATAGGTTTGCTAGAAGTACAAAAGATGCTTTAAATACTATTGAATACTTAAACTGTAAAGG
AGTTCCCCTTATTGTTTTAAATATGGATGAAGATAAGATTGACACAAGTACAGCGATTGGTAAATTAATGATTACGGTTT
TGTATGGTATAGCTGAATTTGAAGCTGACATGATTAAAGAAAGACAATTAGAGGGCATCGAGGAAGTAAAAAGAAGATGT
GTCTATAAAGGAAGACTTAAGAAGCATACAGAAAATCATAGAGGTTTACAGTATGCTCTAGAGTTATTTCATAACAGAGC
AAGTAATAAGCTGACAGTTAAGAGATTGAAGAAATAA

Upstream 100 bases:

>100_bases
AAGTAGGTTATGATACTATCTTTAAAGAGAAGAGTAGTGGAAGAAAGAAGATAGTGAGCAGTTTAACTTGCTTATTGAGA
CGGTGTAAAAAGGTGACATT

Downstream 100 bases:

>100_bases
CTAAGATAAGTAGAGCGACTCTCTATAGAGTAGTGAGCAGTAAGAGGACAGGAAAGTAAGTGTATAAGTGTAAGAAAAAA
GTACGGGGGTGCATATCACC

Product: resolvase x

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTVTKLDRFARSTKDALNTIEYLNCKGVPLIVLNMDEDKIDTSTAIGKLMITVLYGIAEFEADMIKERQLEGIEEVKRRC
VYKGRLKKHTENHRGLQYALELFHNRASNKLTVKRLKK

Sequences:

>Translated_118_residues
MTVTKLDRFARSTKDALNTIEYLNCKGVPLIVLNMDEDKIDTSTAIGKLMITVLYGIAEFEADMIKERQLEGIEEVKRRC
VYKGRLKKHTENHRGLQYALELFHNRASNKLTVKRLKK
>Mature_117_residues
TVTKLDRFARSTKDALNTIEYLNCKGVPLIVLNMDEDKIDTSTAIGKLMITVLYGIAEFEADMIKERQLEGIEEVKRRCV
YKGRLKKHTENHRGLQYALELFHNRASNKLTVKRLKK

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 13669; Mature: 13538

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTKLDRFARSTKDALNTIEYLNCKGVPLIVLNMDEDKIDTSTAIGKLMITVLYGIAEF
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
EADMIKERQLEGIEEVKRRCVYKGRLKKHTENHRGLQYALELFHNRASNKLTVKRLKK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCC
>Mature Secondary Structure 
TVTKLDRFARSTKDALNTIEYLNCKGVPLIVLNMDEDKIDTSTAIGKLMITVLYGIAEF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
EADMIKERQLEGIEEVKRRCVYKGRLKKHTENHRGLQYALELFHNRASNKLTVKRLKK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8380148 [H]