Click here to switch to the map view.

The map label for this gene is oppC [H]

Identifier: 222094910

GI number: 222094910

Start: 1241976

End: 1242992

Strand: Direct

Name: oppC [H]

Synonym: BCQ_1248

Alternate gene names: 222094910

Gene position: 1241976-1242992 (Clockwise)

Preceding gene: 222094909

Following gene: 222094911

Centisome position: 23.82

GC content: 36.68

Gene sequence:

>1017_bases
ATGATGAAAGATGTACAAAAATTATCTCCAGACTTATTTCAACAAGCTAATCAAAATAATGTGGATAATGAAGTCATTGC
CCGTCCAAGCTTAACGTTTTGGCAAGATGTAAGAAGACGTTTGTTCCAACATAAAGGAGCAATGTTTGGTTTAGTTTTAT
TAACGCTTATTATCTTACTAGCAATCTTCGGACCGATGGTAAGTAAGCACTCGTATAAAGAGCAAGATTTAGGACGTGCA
AAATTGCCACCGAAAATTCCAGTTATTGAAAATGTTCATTGGTTACCATTTGACGGTACAGATCAATATGGTGTTGACCA
ATATGAAAAACGTGATATTAAAGAGTATTTCTGGTTTGGTACAGATGATCTTGGACGCGATTTATGGACAAGAACATGGG
AAGGTACACGCGTATCATTATATATCGCTCTTTTAGCAGCAGCAATTGACTTAGTAATTGGGGTTGCATATGGAGGTATT
TCAGCGTTCTATGGCGGTAGAGTAGATAACATTATGCAACGTATTATGGAGATTATTAACGGTATTCCATACTTAATCAT
CGTTATTTTAATGGTAATCATTATGGGATCTGGTATATGGTCAATTACACTCGCAATGGCAATTACAGGTTGGATAGGGA
TGTCGCGTATCGTTCGTGGACAAATCCTTAAATTAAAAAATCAAGAATACGTATTAGCATCTCGTACATTAGGTGCAACA
AATACACAATTAATTGTAAAGCACTTAATTCCGAACGTAATGGGACCAATTATTGTAATGACAATGTTTACAATTCCAAC
AGCGGTGTTTGGTGAGGCGTTCTTAAGCTTCATCGGTTTAGGTATTCAGCCACCATTCGCATCACTTGGTTCTCTTGTAA
ATGACGGTTATAAATCAATTCAAACGTATCCGCATATGATGTTCATCCCTGCGGTTGTCATCAGTATATTAATTTTAGCG
TTTAACTTAATGGCAGACGGATTACGCGATGCGTTAGATCCAAAAATGCGTAAGTAA

Upstream 100 bases:

>100_bases
CTACAATTTTCTATAGTGCGATCTTCATCTTAGTTATTTTCATTGTTGATATTTTATACGGAATTATTGATCCTCGTATT
CGTTTAGCGGGAGGGAAAAA

Downstream 100 bases:

>100_bases
AAGAGGGGAGAGGCAAAGATGAAAACACTGTTAGAGGTAAAAGATTTACAAGTCTCCTTTGATACACATGCAGGTGAAGT
ACAAGCTGTACGCGGCGTTA

Product: oligopeptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MMKDVQKLSPDLFQQANQNNVDNEVIARPSLTFWQDVRRRLFQHKGAMFGLVLLTLIILLAIFGPMVSKHSYKEQDLGRA
KLPPKIPVIENVHWLPFDGTDQYGVDQYEKRDIKEYFWFGTDDLGRDLWTRTWEGTRVSLYIALLAAAIDLVIGVAYGGI
SAFYGGRVDNIMQRIMEIINGIPYLIIVILMVIIMGSGIWSITLAMAITGWIGMSRIVRGQILKLKNQEYVLASRTLGAT
NTQLIVKHLIPNVMGPIIVMTMFTIPTAVFGEAFLSFIGLGIQPPFASLGSLVNDGYKSIQTYPHMMFIPAVVISILILA
FNLMADGLRDALDPKMRK

Sequences:

>Translated_338_residues
MMKDVQKLSPDLFQQANQNNVDNEVIARPSLTFWQDVRRRLFQHKGAMFGLVLLTLIILLAIFGPMVSKHSYKEQDLGRA
KLPPKIPVIENVHWLPFDGTDQYGVDQYEKRDIKEYFWFGTDDLGRDLWTRTWEGTRVSLYIALLAAAIDLVIGVAYGGI
SAFYGGRVDNIMQRIMEIINGIPYLIIVILMVIIMGSGIWSITLAMAITGWIGMSRIVRGQILKLKNQEYVLASRTLGAT
NTQLIVKHLIPNVMGPIIVMTMFTIPTAVFGEAFLSFIGLGIQPPFASLGSLVNDGYKSIQTYPHMMFIPAVVISILILA
FNLMADGLRDALDPKMRK
>Mature_338_residues
MMKDVQKLSPDLFQQANQNNVDNEVIARPSLTFWQDVRRRLFQHKGAMFGLVLLTLIILLAIFGPMVSKHSYKEQDLGRA
KLPPKIPVIENVHWLPFDGTDQYGVDQYEKRDIKEYFWFGTDDLGRDLWTRTWEGTRVSLYIALLAAAIDLVIGVAYGGI
SAFYGGRVDNIMQRIMEIINGIPYLIIVILMVIIMGSGIWSITLAMAITGWIGMSRIVRGQILKLKNQEYVLASRTLGAT
NTQLIVKHLIPNVMGPIIVMTMFTIPTAVFGEAFLSFIGLGIQPPFASLGSLVNDGYKSIQTYPHMMFIPAVVISILILA
FNLMADGLRDALDPKMRK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=328, Percent_Identity=34.7560975609756, Blast_Score=203, Evalue=1e-53,
Organism=Escherichia coli, GI1787054, Length=328, Percent_Identity=30.1829268292683, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=34.9794238683128, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1787760, Length=284, Percent_Identity=33.0985915492958, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1789964, Length=318, Percent_Identity=32.0754716981132, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1788505, Length=278, Percent_Identity=27.3381294964029, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1787549, Length=305, Percent_Identity=25.2459016393443, Blast_Score=98, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37953; Mature: 37953

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKDVQKLSPDLFQQANQNNVDNEVIARPSLTFWQDVRRRLFQHKGAMFGLVLLTLIILL
CCCHHHHCCHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AIFGPMVSKHSYKEQDLGRAKLPPKIPVIENVHWLPFDGTDQYGVDQYEKRDIKEYFWFG
HHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCC
TDDLGRDLWTRTWEGTRVSLYIALLAAAIDLVIGVAYGGISAFYGGRVDNIMQRIMEIIN
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GIPYLIIVILMVIIMGSGIWSITLAMAITGWIGMSRIVRGQILKLKNQEYVLASRTLGAT
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
NTQLIVKHLIPNVMGPIIVMTMFTIPTAVFGEAFLSFIGLGIQPPFASLGSLVNDGYKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QTYPHMMFIPAVVISILILAFNLMADGLRDALDPKMRK
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMKDVQKLSPDLFQQANQNNVDNEVIARPSLTFWQDVRRRLFQHKGAMFGLVLLTLIILL
CCCHHHHCCHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AIFGPMVSKHSYKEQDLGRAKLPPKIPVIENVHWLPFDGTDQYGVDQYEKRDIKEYFWFG
HHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCC
TDDLGRDLWTRTWEGTRVSLYIALLAAAIDLVIGVAYGGISAFYGGRVDNIMQRIMEIIN
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GIPYLIIVILMVIIMGSGIWSITLAMAITGWIGMSRIVRGQILKLKNQEYVLASRTLGAT
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
NTQLIVKHLIPNVMGPIIVMTMFTIPTAVFGEAFLSFIGLGIQPPFASLGSLVNDGYKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QTYPHMMFIPAVVISILILAFNLMADGLRDALDPKMRK
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]