Click here to switch to the map view.

The map label for this gene is yjaU [H]

Identifier: 222094899

GI number: 222094899

Start: 1230614

End: 1231348

Strand: Direct

Name: yjaU [H]

Synonym: BCQ_1237

Alternate gene names: 222094899

Gene position: 1230614-1231348 (Clockwise)

Preceding gene: 222094897

Following gene: 222094900

Centisome position: 23.6

GC content: 34.42

Gene sequence:

>735_bases
ATGAGTATTACGGAACGTTTTTTTTACTTAGAAAAAGAACCATGTGTCATTTATTTACCGGAGAAGCCAAATGGATTTTC
TGTCATGCTTCTAGGTGATTACAACTACTTTATTGAGAATGGTACAAGTTTATGGACACAGCATGCGGGTAGATCTTATT
TTTTACATGGCCTTATTGAGGAAGGCTATACGGTCTTTTCTTCTAATTTATACGGAAGACATTGGGGAAACGACCAATCT
GTTCGTCTAGCGAAACGTCTATATGACGTTGTTCTGAGAAAAGAGACATTAAATGCAAAAATGCACATTATGGCAGATGG
TATGGGGGCACTTGTTGCACTTGAAATGATGAACAAATACCCTGAATGTATACGTTCTGTCATTATGTTAAATCCGTGTT
TAGATTTACCAGAATATGTGGAGTTTGAGAAAGAGCATAAATTTTTTTATAAGAGACTCTTGAAGGAATTAAGTTTAGCG
TATGATGCTAAAGAAGAAGAATTAGAAGCGAAAATAAATAAGAAATCATTTACGCTTCTTCCGTCTTGTGTACCTGTTAA
AATTTTTGTATCAACACAAGAAAAAAGAGGAAGAAAACAGCTGCTACGTAAATACGAGAAAATGAGGCAATTGAACCAAT
GCGATACTTCTGTCTTATTCCATCTGCAAGATGTGAAATATAAAATGGTTAGGCAAACGACTGATTTCTTTAAAAAATAT
GAAGAAGAATTGTGA

Upstream 100 bases:

>100_bases
TATAGAAAAATATTTGTAGATTTTTCAACGCAAATTTGCATTCTGTTCATACATTATAAAAGAGTACTTTTATACGTTTA
GAAAATAAGGCGGGGGAAAA

Downstream 100 bases:

>100_bases
AGCTCCCATATACATAAATGAGGAGCTATTTGTTTCAAGGAGAAAGGGTTGGTGGTATGGAACGCGTGCTAATTATAGGT
GCACTTACGTTTGTAGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSITERFFYLEKEPCVIYLPEKPNGFSVMLLGDYNYFIENGTSLWTQHAGRSYFLHGLIEEGYTVFSSNLYGRHWGNDQS
VRLAKRLYDVVLRKETLNAKMHIMADGMGALVALEMMNKYPECIRSVIMLNPCLDLPEYVEFEKEHKFFYKRLLKELSLA
YDAKEEELEAKINKKSFTLLPSCVPVKIFVSTQEKRGRKQLLRKYEKMRQLNQCDTSVLFHLQDVKYKMVRQTTDFFKKY
EEEL

Sequences:

>Translated_244_residues
MSITERFFYLEKEPCVIYLPEKPNGFSVMLLGDYNYFIENGTSLWTQHAGRSYFLHGLIEEGYTVFSSNLYGRHWGNDQS
VRLAKRLYDVVLRKETLNAKMHIMADGMGALVALEMMNKYPECIRSVIMLNPCLDLPEYVEFEKEHKFFYKRLLKELSLA
YDAKEEELEAKINKKSFTLLPSCVPVKIFVSTQEKRGRKQLLRKYEKMRQLNQCDTSVLFHLQDVKYKMVRQTTDFFKKY
EEEL
>Mature_243_residues
SITERFFYLEKEPCVIYLPEKPNGFSVMLLGDYNYFIENGTSLWTQHAGRSYFLHGLIEEGYTVFSSNLYGRHWGNDQSV
RLAKRLYDVVLRKETLNAKMHIMADGMGALVALEMMNKYPECIRSVIMLNPCLDLPEYVEFEKEHKFFYKRLLKELSLAY
DAKEEELEAKINKKSFTLLPSCVPVKIFVSTQEKRGRKQLLRKYEKMRQLNQCDTSVLFHLQDVKYKMVRQTTDFFKKYE
EEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28916; Mature: 28785

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITERFFYLEKEPCVIYLPEKPNGFSVMLLGDYNYFIENGTSLWTQHAGRSYFLHGLIE
CCCCHHHEEEECCCEEEEECCCCCCEEEEEEECCCEEEECCHHHHHHHCCCHHHHHHHHH
EGYTVFSSNLYGRHWGNDQSVRLAKRLYDVVLRKETLNAKMHIMADGMGALVALEMMNKY
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHH
PECIRSVIMLNPCLDLPEYVEFEKEHKFFYKRLLKELSLAYDAKEEELEAKINKKSFTLL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEC
PSCVPVKIFVSTQEKRGRKQLLRKYEKMRQLNQCDTSVLFHLQDVKYKMVRQTTDFFKKY
CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EEEL
HHCC
>Mature Secondary Structure 
SITERFFYLEKEPCVIYLPEKPNGFSVMLLGDYNYFIENGTSLWTQHAGRSYFLHGLIE
CCCHHHEEEECCCEEEEECCCCCCEEEEEEECCCEEEECCHHHHHHHCCCHHHHHHHHH
EGYTVFSSNLYGRHWGNDQSVRLAKRLYDVVLRKETLNAKMHIMADGMGALVALEMMNKY
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHH
PECIRSVIMLNPCLDLPEYVEFEKEHKFFYKRLLKELSLAYDAKEEELEAKINKKSFTLL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEC
PSCVPVKIFVSTQEKRGRKQLLRKYEKMRQLNQCDTSVLFHLQDVKYKMVRQTTDFFKKY
CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EEEL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]