Click here to switch to the map view.

The map label for this gene is 222094851

Identifier: 222094851

GI number: 222094851

Start: 1177840

End: 1178499

Strand: Direct

Name: 222094851

Synonym: BCQ_1189

Alternate gene names: NA

Gene position: 1177840-1178499 (Clockwise)

Preceding gene: 222094850

Following gene: 222094852

Centisome position: 22.59

GC content: 33.94

Gene sequence:

>660_bases
ATGAAGAAGAACATGTTACGTATAATGGCAACGGTAACTATTATGGGTGGTTTGTTTGTAAGTACGAATGTTCCCAACGT
AAAAGCAGAAGAATATCCAGAAATGATTGTGTTTGATGATGTTCCAGTAAACTACTGGGCATATGACGATATAATGGATG
TAGTATACAATAAAGTAATGTTAGGGTATGGAAATGGTAAGTTTGGTGTAGGTGATAATGTAACAAGAGAACAAGTAGCA
GCAGTGCTGTATCGTACATTGAATTTGAAAAGGGAAGGTCCTTTAAAAAATCCATACAAAGATATTTCTGAGAGAGCAAC
AATGTTTTTAGATGAAATTTTAGTATTAACAGAGCATGGTATTTTTAAAGGTGATGAAAAAGGAAACTTTAGACCAACTG
CACCAGTAACACGCGCAGAAATGGCACAAATTCTTACGAATGCATTTACATTTGAGGTGAAGAAGAACCATACATTTAAA
GATGTACCAAATAATCATTGGGCAAAAAATGCGATTAGTGCACTACAGTCTAATCATGTCATAGTAGGAACAGGAAATGG
GAAATTTGAACCGAATAAAGTTGTAACACGTGAGCAATATGCAACGTTTTTAAATAGAGCTGTTTTTTATTTTCCAGTAA
AAGATGAAGATTATGAATGA

Upstream 100 bases:

>100_bases
TATATTGCATAAATGGTGCAAAGGCAACATATGTAATATTGGAAAGGATTTCAGTCTATTATTTTCCGTTTTTTCAAATG
GAGGTAAAGGGGAGAGGGCA

Downstream 100 bases:

>100_bases
AAGTTAAAATATAAGGATGTTTAAGTTATATCAATATAATATATATCGAGAAAAAAGCGCGGGAATTCCACGCTTTTTTC
TTATTTAAAATTATTTGTAA

Product: s-layer protein

Products: NA

Alternate protein names: Surface layer protein [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKKNMLRIMATVTIMGGLFVSTNVPNVKAEEYPEMIVFDDVPVNYWAYDDIMDVVYNKVMLGYGNGKFGVGDNVTREQVA
AVLYRTLNLKREGPLKNPYKDISERATMFLDEILVLTEHGIFKGDEKGNFRPTAPVTRAEMAQILTNAFTFEVKKNHTFK
DVPNNHWAKNAISALQSNHVIVGTGNGKFEPNKVVTREQYATFLNRAVFYFPVKDEDYE

Sequences:

>Translated_219_residues
MKKNMLRIMATVTIMGGLFVSTNVPNVKAEEYPEMIVFDDVPVNYWAYDDIMDVVYNKVMLGYGNGKFGVGDNVTREQVA
AVLYRTLNLKREGPLKNPYKDISERATMFLDEILVLTEHGIFKGDEKGNFRPTAPVTRAEMAQILTNAFTFEVKKNHTFK
DVPNNHWAKNAISALQSNHVIVGTGNGKFEPNKVVTREQYATFLNRAVFYFPVKDEDYE
>Mature_219_residues
MKKNMLRIMATVTIMGGLFVSTNVPNVKAEEYPEMIVFDDVPVNYWAYDDIMDVVYNKVMLGYGNGKFGVGDNVTREQVA
AVLYRTLNLKREGPLKNPYKDISERATMFLDEILVLTEHGIFKGDEKGNFRPTAPVTRAEMAQILTNAFTFEVKKNHTFK
DVPNNHWAKNAISALQSNHVIVGTGNGKFEPNKVVTREQYATFLNRAVFYFPVKDEDYE

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003343
- InterPro:   IPR001119 [H]

Pfam domain/function: PF02368 Big_2; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 24931; Mature: 24931

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNMLRIMATVTIMGGLFVSTNVPNVKAEEYPEMIVFDDVPVNYWAYDDIMDVVYNKVM
CCCHHHHHHHHHHHHCCEEEECCCCCCCHHHCCCEEEECCCCCCEEHHHHHHHHHHHHEE
LGYGNGKFGVGDNVTREQVAAVLYRTLNLKREGPLKNPYKDISERATMFLDEILVLTEHG
EECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
IFKGDEKGNFRPTAPVTRAEMAQILTNAFTFEVKKNHTFKDVPNNHWAKNAISALQSNHV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCCE
IVGTGNGKFEPNKVVTREQYATFLNRAVFYFPVKDEDYE
EEECCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCC
>Mature Secondary Structure
MKKNMLRIMATVTIMGGLFVSTNVPNVKAEEYPEMIVFDDVPVNYWAYDDIMDVVYNKVM
CCCHHHHHHHHHHHHCCEEEECCCCCCCHHHCCCEEEECCCCCCEEHHHHHHHHHHHHEE
LGYGNGKFGVGDNVTREQVAAVLYRTLNLKREGPLKNPYKDISERATMFLDEILVLTEHG
EECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
IFKGDEKGNFRPTAPVTRAEMAQILTNAFTFEVKKNHTFKDVPNNHWAKNAISALQSNHV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCCE
IVGTGNGKFEPNKVVTREQYATFLNRAVFYFPVKDEDYE
EEECCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8964497 [H]