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The map label for this gene is ctc [H]

Identifier: 222094720

GI number: 222094720

Start: 1052992

End: 1054122

Strand: Direct

Name: ctc [H]

Synonym: BCQ_1058

Alternate gene names: 222094720

Gene position: 1052992-1054122 (Clockwise)

Preceding gene: 222094719

Following gene: 222094721

Centisome position: 20.19

GC content: 33.69

Gene sequence:

>1131_bases
ATGAATTTTAAACAATTAATTTTAGCAGGGGCAGTTATTGCATCAACAACACTAACACCTCTAACAAATGTGCAAGCAGA
AAATACACTAGGATTTAAAGATGTTCCTGAAAATCACTGGTCTTATCAAGCAATTATGGATTTAAAAGAGAAAAATATTG
TGGCTGGTTATGGAAACGGAATGTTTGGTTTTGGTGATAATATTACACGAGGACAAGTAGCTAGACTAATATATGCCTAC
TTGAAGCCAGTAGATGAACTTAATACACAAAACCCTTTCACAGATATAGAAGAGCATATGTTTAAAAAAGAAATTTTAGC
TCTTAATAAAGCTGGTATTATGAACGGATTTGGTGATGGGAAATTTGGTCCAGATAACGTTTTAACGCGTGAACAATTAG
CTGTTGTATTAACAAAGGCTTTTAACTTCAAAGCAACATCTACTACTACTTTCAAAGATGTAGATAAAAATTACTGGGCA
ACAAATGCTATCAGTGCATTACAAGAAAATAAAATTACGACGGGCACAGGTGATAATAAGTTTGAACCACAAAGTCTCGT
GACTCGTGAGCAGTATGCACTATTCTTATACAATGCAATTAATAAATCGGAAAAAGAGCATGAGTCAAAGCCTACTGCTA
TCCCACAAGATTTAGCAGACGAGCTCATTTATTATCATGAAGGTTGGATGGATAGCTCTTCGGTATTAAAAAAATCTATA
TCTAAGGAAGCACAAAATCTTATTACTGAAATTAACGCAAAATATAATGCGGAGCTAAAATATATAGGGATAGGCGGTCC
ACGTTCAGAGGTCGTGTTATTCTCTCCGGTATTAGAAGGGATTCCAGAATTTAATGGGAATTTCACTGTAGAAGGCGATA
ATGAAAGTAACTTTACCGTTAATTTTGTAATTGATAGAGGTCAAGGTAAGAAGGCGTTAGTAGAGTTAGGGAAAAAATGG
ATCAATATGATAAATCCAAACTTAGATTTGAGTACAGAGATTGATAATATAGTGGCTTCTAATACACGCACAGGTAATTT
TGATATAAATAAAAACAATCTTAAAATAGAGATAAGCTTAGAGAAGCAAAATTCTAGTAGCGATCTAATGAGTGTTAAAA
TCCACAAGTAA

Upstream 100 bases:

>100_bases
TTCCATAATTAACCTACAAAAAACATTTTTATATGTTAATATTAAAAAATATGTACGGTATTTTTTTAATATATTATTTT
AAGAATAAGGGGATTCAATT

Downstream 100 bases:

>100_bases
AAAAGAGGAGTGAAATTTCACTCCTCTTTTAATTATATTATTTTTACTGTTATCCCTCATTTGCCTGTAAATGCTCGATA
GGTTCAATTAATAATCAATG

Product: s-layer-like domain protein

Products: NA

Alternate protein names: Parasporal protein [H]

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MNFKQLILAGAVIASTTLTPLTNVQAENTLGFKDVPENHWSYQAIMDLKEKNIVAGYGNGMFGFGDNITRGQVARLIYAY
LKPVDELNTQNPFTDIEEHMFKKEILALNKAGIMNGFGDGKFGPDNVLTREQLAVVLTKAFNFKATSTTTFKDVDKNYWA
TNAISALQENKITTGTGDNKFEPQSLVTREQYALFLYNAINKSEKEHESKPTAIPQDLADELIYYHEGWMDSSSVLKKSI
SKEAQNLITEINAKYNAELKYIGIGGPRSEVVLFSPVLEGIPEFNGNFTVEGDNESNFTVNFVIDRGQGKKALVELGKKW
INMINPNLDLSTEIDNIVASNTRTGNFDINKNNLKIEISLEKQNSSSDLMSVKIHK

Sequences:

>Translated_376_residues
MNFKQLILAGAVIASTTLTPLTNVQAENTLGFKDVPENHWSYQAIMDLKEKNIVAGYGNGMFGFGDNITRGQVARLIYAY
LKPVDELNTQNPFTDIEEHMFKKEILALNKAGIMNGFGDGKFGPDNVLTREQLAVVLTKAFNFKATSTTTFKDVDKNYWA
TNAISALQENKITTGTGDNKFEPQSLVTREQYALFLYNAINKSEKEHESKPTAIPQDLADELIYYHEGWMDSSSVLKKSI
SKEAQNLITEINAKYNAELKYIGIGGPRSEVVLFSPVLEGIPEFNGNFTVEGDNESNFTVNFVIDRGQGKKALVELGKKW
INMINPNLDLSTEIDNIVASNTRTGNFDINKNNLKIEISLEKQNSSSDLMSVKIHK
>Mature_376_residues
MNFKQLILAGAVIASTTLTPLTNVQAENTLGFKDVPENHWSYQAIMDLKEKNIVAGYGNGMFGFGDNITRGQVARLIYAY
LKPVDELNTQNPFTDIEEHMFKKEILALNKAGIMNGFGDGKFGPDNVLTREQLAVVLTKAFNFKATSTTTFKDVDKNYWA
TNAISALQENKITTGTGDNKFEPQSLVTREQYALFLYNAINKSEKEHESKPTAIPQDLADELIYYHEGWMDSSSVLKKSI
SKEAQNLITEINAKYNAELKYIGIGGPRSEVVLFSPVLEGIPEFNGNFTVEGDNESNFTVNFVIDRGQGKKALVELGKKW
INMINPNLDLSTEIDNIVASNTRTGNFDINKNNLKIEISLEKQNSSSDLMSVKIHK

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003343
- InterPro:   IPR001119 [H]

Pfam domain/function: PF02368 Big_2; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 41929; Mature: 41929

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKQLILAGAVIASTTLTPLTNVQAENTLGFKDVPENHWSYQAIMDLKEKNIVAGYGNG
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCC
MFGFGDNITRGQVARLIYAYLKPVDELNTQNPFTDIEEHMFKKEILALNKAGIMNGFGDG
CCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
KFGPDNVLTREQLAVVLTKAFNFKATSTTTFKDVDKNYWATNAISALQENKITTGTGDNK
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
FEPQSLVTREQYALFLYNAINKSEKEHESKPTAIPQDLADELIYYHEGWMDSSSVLKKSI
CCCHHHHHHHHHHEEEHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
SKEAQNLITEINAKYNAELKYIGIGGPRSEVVLFSPVLEGIPEFNGNFTVEGDNESNFTV
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEHHHHCCCCCCCEEEEECCCCCCEEE
NFVIDRGQGKKALVELGKKWINMINPNLDLSTEIDNIVASNTRTGNFDINKNNLKIEISL
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEECCCCEEEEEEE
EKQNSSSDLMSVKIHK
ECCCCCCCEEEEEEEC
>Mature Secondary Structure
MNFKQLILAGAVIASTTLTPLTNVQAENTLGFKDVPENHWSYQAIMDLKEKNIVAGYGNG
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCC
MFGFGDNITRGQVARLIYAYLKPVDELNTQNPFTDIEEHMFKKEILALNKAGIMNGFGDG
CCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
KFGPDNVLTREQLAVVLTKAFNFKATSTTTFKDVDKNYWATNAISALQENKITTGTGDNK
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
FEPQSLVTREQYALFLYNAINKSEKEHESKPTAIPQDLADELIYYHEGWMDSSSVLKKSI
CCCHHHHHHHHHHEEEHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
SKEAQNLITEINAKYNAELKYIGIGGPRSEVVLFSPVLEGIPEFNGNFTVEGDNESNFTV
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEHHHHCCCCCCCEEEEECCCCCCEEE
NFVIDRGQGKKALVELGKKWINMINPNLDLSTEIDNIVASNTRTGNFDINKNNLKIEISL
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEECCCCEEEEEEE
EKQNSSSDLMSVKIHK
ECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA