Click here to switch to the map view.

The map label for this gene is yfcA [C]

Identifier: 222094688

GI number: 222094688

Start: 1025299

End: 1026066

Strand: Direct

Name: yfcA [C]

Synonym: BCQ_1026

Alternate gene names: 222094688

Gene position: 1025299-1026066 (Clockwise)

Preceding gene: 222094686

Following gene: 222094693

Centisome position: 19.66

GC content: 36.46

Gene sequence:

>768_bases
ATGGATTTTTATTTAGACCCATCTGTATTAATGATTTTGATTGTTTTTGGGTTTGTGGCTGCATTTATTGATTCAGTTGT
AGGCGGTGGTGGATTAATCGCGTTACCAGCTTTATTATTTACAGGATTGAATCCAGCAAGTGCAGTAGCCACGAATAAAT
TAGCATCAACAATGGGGAGTGCCACTAGTAATATTGTGTTTTATCGTTCTGGTAATCTTGATTTGAAATCGGCGTTTAAA
TTATTTCCAATCACTTTCATAGGTTCCATAATAGGGGCATGGACCGTTCATTTAATGAATCCAGAAGTATTGAAGCCATT
GATGCTGGTAATGCTTGGCGCAGTCGCTATTTATACGATATTCAAGAAGGATTGGGGAAGTATTTCCACTCATAAAAAAT
TGTCTGGTCGACACGTCATTATTTTTACCTTTTTTATTTTTGTTATTGGTTTTTATGATGGATTTCTAGGTCCTGGTACA
GGTTCATTTTTAATGTTTGCTCTTTTATTCATTGGGTATGATTTTTTAAAAGCAGCAGGTACGGCGAAGTTTCTTAATTT
AGGAAGTAACGTTGGTGCATTGTTCATGTTTATGTATGTAGGTCAAGTAAACTATGCGTATGGATTCATAATGGGAATTG
CTCAAATTGCTGGAGGAATCGCCGGATCCAGATTTGCTATAAAAAAAGGAAGCGGGTATGTTCGCGCCCTTTTCATTACC
GTAACTTGTTTGTTGTTAGCGAAAAATCTGTATGACTATGTGCAGTAA

Upstream 100 bases:

>100_bases
GATTAAAGTTTCACTTTATATTTCAACGTTACAATAACTCTTTACATTTAGCAAATTGATAGTTACTATTACAATAGTGA
CTAAAGGGGAGGCTATTAGT

Downstream 100 bases:

>100_bases
GTAATCTAAGTGAAGAGAATGAAAATAATATAAACTCATATTTTTTCATATAAAATTTCATTTGTTTTATTTACATAATA
TCTTTACAATCATTTGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF9 [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MDFYLDPSVLMILIVFGFVAAFIDSVVGGGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVFYRSGNLDLKSAFK
LFPITFIGSIIGAWTVHLMNPEVLKPLMLVMLGAVAIYTIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGT
GSFLMFALLFIGYDFLKAAGTAKFLNLGSNVGALFMFMYVGQVNYAYGFIMGIAQIAGGIAGSRFAIKKGSGYVRALFIT
VTCLLLAKNLYDYVQ

Sequences:

>Translated_255_residues
MDFYLDPSVLMILIVFGFVAAFIDSVVGGGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVFYRSGNLDLKSAFK
LFPITFIGSIIGAWTVHLMNPEVLKPLMLVMLGAVAIYTIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGT
GSFLMFALLFIGYDFLKAAGTAKFLNLGSNVGALFMFMYVGQVNYAYGFIMGIAQIAGGIAGSRFAIKKGSGYVRALFIT
VTCLLLAKNLYDYVQ
>Mature_255_residues
MDFYLDPSVLMILIVFGFVAAFIDSVVGGGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVFYRSGNLDLKSAFK
LFPITFIGSIIGAWTVHLMNPEVLKPLMLVMLGAVAIYTIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGT
GSFLMFALLFIGYDFLKAAGTAKFLNLGSNVGALFMFMYVGQVNYAYGFIMGIAQIAGGIAGSRFAIKKGSGYVRALFIT
VTCLLLAKNLYDYVQ

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=256, Percent_Identity=35.546875, Blast_Score=143, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27461; Mature: 27461

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]