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The map label for this gene is yrhO [H]

Identifier: 222094687

GI number: 222094687

Start: 1024251

End: 1025036

Strand: Reverse

Name: yrhO [H]

Synonym: BCQ_1025

Alternate gene names: 222094687

Gene position: 1025036-1024251 (Counterclockwise)

Preceding gene: 222094689

Following gene: 222094684

Centisome position: 19.66

GC content: 35.11

Gene sequence:

>786_bases
GTGGACTACATAGTGCAACAGCTTAAAAAAATTGGTTTTAATGAATATGAAGCTAAATCTTATGTATCTCTTGTGAAACA
AGGGCCTGTCACAGCCTACCAAGTGAGTAAAGATTCGGGTGTCCCAAGAGCGCGAATTTATGAGATTTTAGGTAACCTTG
TAGAAAAAGGAATTGTCATGAAAGAAGAAATAAATGACACCACCCGCTATTCACCCCTACCTGTTGAAATCTTTTTACAG
AAGGCTCAATCAGAATGGCAGTCTACTTATGAAGGAATTAGTGATTCATTAAAAAAACTAGAAACTTCTGAGGAAAAAAC
GGATAATCGAGTGATTACTTTAAAAGACAATCAAACAATCATTAGCTACTGTCAAACATTAATAAAAAAAGCAAAACAAC
GTATTGTCATTTCAATGTGGGATGAAATGTATGAAGCGTTAAAAAAGGATCTAACTGAGGTAGCTGATAAAGTCACAGTA
CAAGGCATTACCTTGCATGTTGAAAATCCTATTAAAAATCTAGAAGCCCATCGTATAACAACTTATACAGAAACCCTCTC
TACAGAGCATTGGTTTATTTTATCAATAGATTCTAAAGAAATGATTTATGGCCCATCACTTGAAGAGCGTAATATTGCTT
TTTATACAGATGACCCCGTTCATATATACTTATTAGAGGATTATGTATGGCATGATGTTTTAGTAAATCGACTTGTCCGA
CGTAGCCAAGATGATTTGGAGCAATGGATTACTGCGGAGAGACGATCTTTCTTTATGGGGAAATAA

Upstream 100 bases:

>100_bases
GCCCGCCCCCCACCTAACTTCTTTGCTTCCGCTGAATTTTGAGGTGGGGGTCTTACTGCCCGTTAAAGCGGGATAAAAGC
AAACATCGGAGGACGAAAAA

Downstream 100 bases:

>100_bases
GGAACATATTCAAAAAATAAAGCATAAGTGAATACACTGGAAAACTTATGCTTTATTTTATATGCAAAGTAATACTCAAG
TCTTTTCACTATTTCCCCTC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVMKEEINDTTRYSPLPVEIFLQ
KAQSEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTIISYCQTLIKKAKQRIVISMWDEMYEALKKDLTEVADKVTV
QGITLHVENPIKNLEAHRITTYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDYVWHDVLVNRLVR
RSQDDLEQWITAERRSFFMGK

Sequences:

>Translated_261_residues
MDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVMKEEINDTTRYSPLPVEIFLQ
KAQSEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTIISYCQTLIKKAKQRIVISMWDEMYEALKKDLTEVADKVTV
QGITLHVENPIKNLEAHRITTYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDYVWHDVLVNRLVR
RSQDDLEQWITAERRSFFMGK
>Mature_261_residues
MDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVMKEEINDTTRYSPLPVEIFLQ
KAQSEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTIISYCQTLIKKAKQRIVISMWDEMYEALKKDLTEVADKVTV
QGITLHVENPIKNLEAHRITTYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDYVWHDVLVNRLVR
RSQDDLEQWITAERRSFFMGK

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 30488; Mature: 30488

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVM
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCH
KEEINDTTRYSPLPVEIFLQKAQSEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCHH
ISYCQTLIKKAKQRIVISMWDEMYEALKKDLTEVADKVTVQGITLHVENPIKNLEAHRIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHCCHHHHEE
TYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDYVWHDVLVNRLVR
HHHHHCCCCCEEEEEECCCCEEECCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHH
RSQDDLEQWITAERRSFFMGK
CCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVM
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCH
KEEINDTTRYSPLPVEIFLQKAQSEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCHH
ISYCQTLIKKAKQRIVISMWDEMYEALKKDLTEVADKVTVQGITLHVENPIKNLEAHRIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHCCHHHHEE
TYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDYVWHDVLVNRLVR
HHHHHCCCCCEEEEEECCCCEEECCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHH
RSQDDLEQWITAERRSFFMGK
CCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]