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The map label for this gene is arcB [H]

Identifier: 222094651

GI number: 222094651

Start: 980818

End: 981795

Strand: Direct

Name: arcB [H]

Synonym: BCQ_0989

Alternate gene names: 222094651

Gene position: 980818-981795 (Clockwise)

Preceding gene: 222094650

Following gene: 222094652

Centisome position: 18.81

GC content: 41.72

Gene sequence:

>978_bases
ATGCTAGTCCTAAGCGCGAACGAACAACGAAACTTAGTAAATATGAATGAAGTCATTGAATATGCGGCGCTTGCCTTAAA
AGAGTTTTCCGCAGAAAGAACAATCACGCCAATTCGCGGTTCATTACCATTTGCGAACGAGCAAAATACGGCATTAATTA
TGCCTTCAGTCGCAGAAGGGCTTGAGGCACTTGGTTTAAAAGTAGTAACAGTAGTCCCCGAGAACAAAAAGATAGGAAAG
AAAACGATAAACGGGATTGTGATGCTATCAGACTTTCAAACGGGAGAACCGCTCGCACTTTTAGAAGGATCCTACTTAAC
GATGATTCGAACAGGCGCCTTATCAGGAGTAGCGACAAAACATTTAGCTCGTCATACCGCAAAAACTTTATGTATTATCG
GGACAGGCGAACAAGCAAAGGGAATTGCTGAAGCTATATTCGCAGTTAGAGATATTGAAAAAGTCATTTTATACAATCGC
ACAGAAAAAAAAGCGTATGCATTCTCGCAATATATACAAGAGAAATTTGGTAAACCTGCTTACGTTCACACCAATGCAAA
TGAAGCAATAAGCGAAGCAGACATCATCGTCACAACTACGAACGCATCTACACCAGTCTTCTCAAAAAAACTACAAAAAG
GCGTCCACGTAAACGCCGTCGGTTCATTCAAACCGAACATGCAAGAACTACCATCTCACGCTATTGCTAATGCAAATAAA
GTAGTAGTCGAATCGAAAGAAGCAGCATTAGAAGAGACAGGGGACCTTCAAGTTCCGATACAGGAAGGTTTATTCAAAGC
TAGCGAGATCCACGCTGAACTTGGTCAAATTATAAGCGGAGAAAAAGCAGGTAGGGAGAATGATGAAGAGATTACTGTTT
TTAAATCGGTTGGTTTGGCGGTAGTGGATATTATTGTTGCGAAGTATTTGTATGAGAGAGCGGTGGAGCGCGGAGTTGGG
GAGAGGATTGAGTTTTGA

Upstream 100 bases:

>100_bases
GGGCATGCATTTATTACAGGATTTCATCAGTTCGTTATAGACCCGAGAGATGATTTGAATCGGGGATTTTTGTTAGGATA
GAAGAAGGAGGTGGAAAGAT

Downstream 100 bases:

>100_bases
GAGGGGCTGCCTTTTGGTGGTCTTTTTTTGTTTGGGGTGTTTTATACGGTTGTGGAATTGGTTGTTTAGAGAGAGGGGGT
AATCACGAAGAGAATGATAA

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MLVLSANEQRNLVNMNEVIEYAALALKEFSAERTITPIRGSLPFANEQNTALIMPSVAEGLEALGLKVVTVVPENKKIGK
KTINGIVMLSDFQTGEPLALLEGSYLTMIRTGALSGVATKHLARHTAKTLCIIGTGEQAKGIAEAIFAVRDIEKVILYNR
TEKKAYAFSQYIQEKFGKPAYVHTNANEAISEADIIVTTTNASTPVFSKKLQKGVHVNAVGSFKPNMQELPSHAIANANK
VVVESKEAALEETGDLQVPIQEGLFKASEIHAELGQIISGEKAGRENDEEITVFKSVGLAVVDIIVAKYLYERAVERGVG
ERIEF

Sequences:

>Translated_325_residues
MLVLSANEQRNLVNMNEVIEYAALALKEFSAERTITPIRGSLPFANEQNTALIMPSVAEGLEALGLKVVTVVPENKKIGK
KTINGIVMLSDFQTGEPLALLEGSYLTMIRTGALSGVATKHLARHTAKTLCIIGTGEQAKGIAEAIFAVRDIEKVILYNR
TEKKAYAFSQYIQEKFGKPAYVHTNANEAISEADIIVTTTNASTPVFSKKLQKGVHVNAVGSFKPNMQELPSHAIANANK
VVVESKEAALEETGDLQVPIQEGLFKASEIHAELGQIISGEKAGRENDEEITVFKSVGLAVVDIIVAKYLYERAVERGVG
ERIEF
>Mature_325_residues
MLVLSANEQRNLVNMNEVIEYAALALKEFSAERTITPIRGSLPFANEQNTALIMPSVAEGLEALGLKVVTVVPENKKIGK
KTINGIVMLSDFQTGEPLALLEGSYLTMIRTGALSGVATKHLARHTAKTLCIIGTGEQAKGIAEAIFAVRDIEKVILYNR
TEKKAYAFSQYIQEKFGKPAYVHTNANEAISEADIIVTTTNASTPVFSKKLQKGVHVNAVGSFKPNMQELPSHAIANANK
VVVESKEAALEETGDLQVPIQEGLFKASEIHAELGQIISGEKAGRENDEEITVFKSVGLAVVDIIVAKYLYERAVERGVG
ERIEF

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=316, Percent_Identity=33.2278481012658, Blast_Score=145, Evalue=4e-35,
Organism=Homo sapiens, GI62241008, Length=281, Percent_Identity=33.8078291814947, Blast_Score=145, Evalue=6e-35,
Organism=Drosophila melanogaster, GI24642678, Length=263, Percent_Identity=32.319391634981, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 35281; Mature: 35281

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLSANEQRNLVNMNEVIEYAALALKEFSAERTITPIRGSLPFANEQNTALIMPSVAEG
CEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHH
LEALGLKVVTVVPENKKIGKKTINGIVMLSDFQTGEPLALLEGSYLTMIRTGALSGVATK
HHHCCEEEEEEECCCCHHCHHHHCCEEEEECCCCCCCEEEECCCEEEEEECCCHHHHHHH
HLARHTAKTLCIIGTGEQAKGIAEAIFAVRDIEKVILYNRTEKKAYAFSQYIQEKFGKPA
HHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCE
YVHTNANEAISEADIIVTTTNASTPVFSKKLQKGVHVNAVGSFKPNMQELPSHAIANANK
EEECCCHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCHHHCCHHHHCCCCE
VVVESKEAALEETGDLQVPIQEGLFKASEIHAELGQIISGEKAGRENDEEITVFKSVGLA
EEEECHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHH
VVDIIVAKYLYERAVERGVGERIEF
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLVLSANEQRNLVNMNEVIEYAALALKEFSAERTITPIRGSLPFANEQNTALIMPSVAEG
CEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHH
LEALGLKVVTVVPENKKIGKKTINGIVMLSDFQTGEPLALLEGSYLTMIRTGALSGVATK
HHHCCEEEEEEECCCCHHCHHHHCCEEEEECCCCCCCEEEECCCEEEEEECCCHHHHHHH
HLARHTAKTLCIIGTGEQAKGIAEAIFAVRDIEKVILYNRTEKKAYAFSQYIQEKFGKPA
HHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCE
YVHTNANEAISEADIIVTTTNASTPVFSKKLQKGVHVNAVGSFKPNMQELPSHAIANANK
EEECCCHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCHHHCCHHHHCCCCE
VVVESKEAALEETGDLQVPIQEGLFKASEIHAELGQIISGEKAGRENDEEITVFKSVGLA
EEEECHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHH
VVDIIVAKYLYERAVERGVGERIEF
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]