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The map label for this gene is racE [H]

Identifier: 222094594

GI number: 222094594

Start: 911411

End: 912241

Strand: Direct

Name: racE [H]

Synonym: BCQ_0932

Alternate gene names: 222094594

Gene position: 911411-912241 (Clockwise)

Preceding gene: 222094588

Following gene: 222094595

Centisome position: 17.48

GC content: 38.27

Gene sequence:

>831_bases
ATGTCTGTATGTCATAAACATTCAGTAATAGGTGTGTTAGATTCGGGAGTTGGGGGATTAACAGTTGCGAGCGAAATTAT
AAGACAATTGCCTAAAGAGAGCATTTATTATATTGGTGATAATGAACGTTGTCCGTATGGGCCAAGAAGTGTAGAAGAGG
TACAATCTTTCGTATTTGAAATGGTTGAGTTCCTCAAACAGTTTCCGTTAAAAGCTCTAGTTGTAGCATGTAATACTGCT
GCAGCTGCTGCATTGACTGCGCTGCAAGAAGCACTTTCTATTCCGGTTATTGGCGTTATACATCCAGGAGCAAGAGCGGC
AATTAAAGTGACGAAGAAAGGGGAAATCGGAGTAATTGGAACTGTAGGTACGATAAAATCTAATATGTACGAAAAAGCAT
TGCATGAGCTTGATACATATTTGAAAGTGCATAGTCATGCGTGCCCGACCTTAGCTACAGTTGTAGAAAATCAATTAGAA
GATACAGCATATGTAACCGAGCAAGTAAAACAAGCTTTACTGCCATTAACGAAAGAAGATATAGATACGTTAATTCTTGG
GTGTACGCATTATCCACTTTTAGAGTCTTATATTAAAAAGGAACTAGGAGAGGATGTAACGATTATTAGTTCTGCAGAAG
AAACAGCGATAGAGTTAAGCACAATTTTACAGCATAAAGGAATTTTGTCTGACAATCTGAATCCTGAGCATCGATTTTTT
ACAACAGGCTCTGCCTTATCATTTGAACATATTGCTGAGCGTTGGCTAGGATATCACATTTCTGTAGAATGTGTGGATTT
ACCCGTAAAGAATGCTCGCATCTGTAATTAG

Upstream 100 bases:

>100_bases
AGTTTGTGATTAAAAGCAAGAGGGATTATTATGTAATATTGAATTTTCATAATATAATAAATGTTGTTGGCGCTAGATGA
TTGAAAAGGGGATGAAGTAT

Downstream 100 bases:

>100_bases
ACTGTATGAAAGTACTTTTTGTTCAATAAATCAGGTTAGTTGCATAAGAAGGAAAAAATGCACTTTTAATTGAAAGGATT
AAGGTCATTTCAATTAAAGG

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSVCHKHSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTA
AAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSNMYEKALHELDTYLKVHSHACPTLATVVENQLE
DTAYVTEQVKQALLPLTKEDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFF
TTGSALSFEHIAERWLGYHISVECVDLPVKNARICN

Sequences:

>Translated_276_residues
MSVCHKHSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTA
AAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSNMYEKALHELDTYLKVHSHACPTLATVVENQLE
DTAYVTEQVKQALLPLTKEDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFF
TTGSALSFEHIAERWLGYHISVECVDLPVKNARICN
>Mature_275_residues
SVCHKHSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTAA
AAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSNMYEKALHELDTYLKVHSHACPTLATVVENQLED
TAYVTEQVKQALLPLTKEDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFFT
TGSALSFEHIAERWLGYHISVECVDLPVKNARICN

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=222, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 30197; Mature: 30066

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVCHKHSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFE
CCCCHHCCEEEECCCCCCHHHHHHHHHHHCCHHCEEEECCCCCCCCCCCCHHHHHHHHHH
MVEFLKQFPLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEEE
TVGTIKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQALLPLTKED
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFF
HHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
TTGSALSFEHIAERWLGYHISVECVDLPVKNARICN
ECCCCCCHHHHHHHHHCEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SVCHKHSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFE
CCCHHCCEEEECCCCCCHHHHHHHHHHHCCHHCEEEECCCCCCCCCCCCHHHHHHHHHH
MVEFLKQFPLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEEE
TVGTIKSNMYEKALHELDTYLKVHSHACPTLATVVENQLEDTAYVTEQVKQALLPLTKED
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFF
HHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
TTGSALSFEHIAERWLGYHISVECVDLPVKNARICN
ECCCCCCHHHHHHHHHCEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA