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The map label for this gene is arcD [H]

Identifier: 222094593

GI number: 222094593

Start: 909455

End: 910879

Strand: Reverse

Name: arcD [H]

Synonym: BCQ_0931

Alternate gene names: 222094593

Gene position: 910879-909455 (Counterclockwise)

Preceding gene: 222094596

Following gene: 222094592

Centisome position: 17.47

GC content: 39.23

Gene sequence:

>1425_bases
ATGCAACAAAAAAAATGGGGCTTTTGGGTACTCACAGCTTTCGTTGTCGGTAATATGGTTGGCGCTGGTATTTTCATGGT
GCCAAGTACGTTGGCACAAACAGCAAGCCCTCTCGGTGTCACTTTAGCTTGGTTAACAACAGGGTTTGGTGTTTTAATGC
TAGCTCTTGTTTTCGGTAATTTAGCAATTCGTCGTCCTGATTTAACGACAGGACCACAAAGTCATGCATATGCTTTATTC
TCAACACCAAAAAAGAAAAAAATGGCTGGTTTCAGTATGGTATGGGGATATTGGGTTGCAAACTGGGCAAGTAACGTTGC
CATCATTACATCATTTGCGGGATATTTATCACTCTTCTTCCCGATTATGAAAGATACACGACTACTATTTTCAATCGGTT
CTTTTAATGTAGAAGTCGGAAAACTAATTACATTTACGATTTGTTCCATCTTACTTTGGGGAACTCATATTATATTAACA
AACGGTGTAAGCGGAGCTGGAAAGCTAAACTTCTTAGCAACAACAACGAAAGTAACTGGATTCCTTTTATTTATCGTCGT
TACGTTATTTGCATTCGAAGCTTCTAAGTTTGGACAATGGTACACACCGATGATCGATAAATCAGGTGTATCACACGGTC
TACTTTCACAAGTAAACTTAGCTGCTCTTACGACGCTTTGGGCATTTATCGGAATTGAATCAGCGGTTCTTTTATCAAAC
CGGGCCGTTTCTCCAAAAACGGTAAAACGCGCAACAGTTGCGGGATTACTTATTACAGTTGCGATTTACTTAGGAATTAC
AATTTTAACAATGGGTGTACTTCACATTGATAAATTACAAGCTTCTGAACGTCCATTAGCAGATGCACTAAACGCTGCAA
TGGGTCATGGCGGCGGGAAACTGATGGCATTACTTGCTCTTACTTCCCTATTCGGTTCCATCTTAGGCTGGATTTTATTA
AGCTCAGAAGTACCGTATCAAGCAGCAAAAGAAGGTTTCTTCCCTTCCTTCTTCACAAAAACAAACAAAAAAGGAAGTCC
AATTTATTCATTACGATTAACAAACATTATGTCGCAAGTGTTCTTATTCTCAACATTATCAGGAACAATTGCGGAAGCTT
ATACATTCGTTATTACTGTATCGACACTGGCCTACCTCATTCCATATCTCGTTTCACCAATCTTCCAGTTAAAACTAGTC
GCAACTGGTGAAACGTATAAAAATGAAATACGGGCAAGAATTACAGATGGCATAGTCGCAGTGATTGCACTTTGCTACGC
ACTATGGGTTATTAAAACGGGCGCAGCCGATATAAAAACATTCCTTCTCGGAATTGGTTTATTCGTAATCGGCTTTGCCT
TCTATCCATTAATGAATCGTGATCAGAAAAAAAATAACGAAAAGAAAAACGGGCAAGTTGCATAA

Upstream 100 bases:

>100_bases
CGTGCTTTTTTTGTTTTGTTTGGGACTTCTCTTCCTGACTCAGGAAGACATACATATCTCCTCGCTTGACTTGGTTATAC
TAACTTTGGAGGTATTTTCT

Downstream 100 bases:

>100_bases
CGCAATTTGCTCGTTTTTTCTTTTACAAAACATATATAATAGAACAAAGAGGTGAAAAACATGTCAATCGAATCACTATG
GAGCAGCCGTTTCCAACAAC

Product: arginine/ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTTGFGVLMLALVFGNLAIRRPDLTTGPQSHAYALF
STPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFFPIMKDTRLLFSIGSFNVEVGKLITFTICSILLWGTHIILT
NGVSGAGKLNFLATTTKVTGFLLFIVVTLFAFEASKFGQWYTPMIDKSGVSHGLLSQVNLAALTTLWAFIGIESAVLLSN
RAVSPKTVKRATVAGLLITVAIYLGITILTMGVLHIDKLQASERPLADALNAAMGHGGGKLMALLALTSLFGSILGWILL
SSEVPYQAAKEGFFPSFFTKTNKKGSPIYSLRLTNIMSQVFLFSTLSGTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLV
ATGETYKNEIRARITDGIVAVIALCYALWVIKTGAADIKTFLLGIGLFVIGFAFYPLMNRDQKKNNEKKNGQVA

Sequences:

>Translated_474_residues
MQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTTGFGVLMLALVFGNLAIRRPDLTTGPQSHAYALF
STPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFFPIMKDTRLLFSIGSFNVEVGKLITFTICSILLWGTHIILT
NGVSGAGKLNFLATTTKVTGFLLFIVVTLFAFEASKFGQWYTPMIDKSGVSHGLLSQVNLAALTTLWAFIGIESAVLLSN
RAVSPKTVKRATVAGLLITVAIYLGITILTMGVLHIDKLQASERPLADALNAAMGHGGGKLMALLALTSLFGSILGWILL
SSEVPYQAAKEGFFPSFFTKTNKKGSPIYSLRLTNIMSQVFLFSTLSGTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLV
ATGETYKNEIRARITDGIVAVIALCYALWVIKTGAADIKTFLLGIGLFVIGFAFYPLMNRDQKKNNEKKNGQVA
>Mature_474_residues
MQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTTGFGVLMLALVFGNLAIRRPDLTTGPQSHAYALF
STPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFFPIMKDTRLLFSIGSFNVEVGKLITFTICSILLWGTHIILT
NGVSGAGKLNFLATTTKVTGFLLFIVVTLFAFEASKFGQWYTPMIDKSGVSHGLLSQVNLAALTTLWAFIGIESAVLLSN
RAVSPKTVKRATVAGLLITVAIYLGITILTMGVLHIDKLQASERPLADALNAAMGHGGGKLMALLALTSLFGSILGWILL
SSEVPYQAAKEGFFPSFFTKTNKKGSPIYSLRLTNIMSQVFLFSTLSGTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLV
ATGETYKNEIRARITDGIVAVIALCYALWVIKTGAADIKTFLLGIGLFVIGFAFYPLMNRDQKKNNEKKNGQVA

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=474, Percent_Identity=31.2236286919831, Blast_Score=186, Evalue=4e-48,
Organism=Escherichia coli, GI2367353, Length=440, Percent_Identity=29.3181818181818, Blast_Score=158, Evalue=8e-40,
Organism=Escherichia coli, GI1790575, Length=399, Percent_Identity=24.3107769423559, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1786908, Length=398, Percent_Identity=24.1206030150754, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87082250, Length=370, Percent_Identity=26.2162162162162, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51367; Mature: 51367

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTTGFGVLMLALVFGN
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
LAIRRPDLTTGPQSHAYALFSTPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFF
CEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
PIMKDTRLLFSIGSFNVEVGKLITFTICSILLWGTHIILTNGVSGAGKLNFLATTTKVTG
HHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEHHHHHH
FLLFIVVTLFAFEASKFGQWYTPMIDKSGVSHGLLSQVNLAALTTLWAFIGIESAVLLSN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
RAVSPKTVKRATVAGLLITVAIYLGITILTMGVLHIDKLQASERPLADALNAAMGHGGGK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH
LMALLALTSLFGSILGWILLSSEVPYQAAKEGFFPSFFTKTNKKGSPIYSLRLTNIMSQV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHCCCCCCCCEEEHHHHHHHHHH
FLFSTLSGTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLVATGETYKNEIRARITDGIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHH
VIALCYALWVIKTGAADIKTFLLGIGLFVIGFAFYPLMNRDQKKNNEKKNGQVA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTTGFGVLMLALVFGN
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
LAIRRPDLTTGPQSHAYALFSTPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFF
CEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
PIMKDTRLLFSIGSFNVEVGKLITFTICSILLWGTHIILTNGVSGAGKLNFLATTTKVTG
HHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEHHHHHH
FLLFIVVTLFAFEASKFGQWYTPMIDKSGVSHGLLSQVNLAALTTLWAFIGIESAVLLSN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
RAVSPKTVKRATVAGLLITVAIYLGITILTMGVLHIDKLQASERPLADALNAAMGHGGGK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH
LMALLALTSLFGSILGWILLSSEVPYQAAKEGFFPSFFTKTNKKGSPIYSLRLTNIMSQV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHCCCCCCCCEEEHHHHHHHHHH
FLFSTLSGTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLVATGETYKNEIRARITDGIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHH
VIALCYALWVIKTGAADIKTFLLGIGLFVIGFAFYPLMNRDQKKNNEKKNGQVA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]