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The map label for this gene is bkdR [H]

Identifier: 222094578

GI number: 222094578

Start: 895915

End: 896409

Strand: Direct

Name: bkdR [H]

Synonym: BCQ_0916

Alternate gene names: 222094578

Gene position: 895915-896409 (Clockwise)

Preceding gene: 222094576

Following gene: 222094579

Centisome position: 17.18

GC content: 34.95

Gene sequence:

>495_bases
ATGGAGTCGTCTGTTATTAAAGTGTTGGATGATTTAGATGTACAAATTTTAGATATATTACAGAAGGAGTCACAAGTAAG
TAATGCAGAGCTTGCGCGACGTGTTAATTTATCACCAGCTGCGATGCATGCGAGAATAAAAAGATTAGATGGAGAAGGAT
TCATTGATAAGCAAGTAGCCATTTTAAACCAAGAAAAGCTTGGTTTTGATTTGTTATGCTTCATTTTTATGAGTACGAAT
ATTCATCAATCGGATAAACTTGAAGTGTTGGAAAAAGAATTAGAAGCGATGCCTGAAGTGTTAGAATGTCACTGCTTAAC
AGGAGAATATGATTATTTATTAAAGGTCGCAAATCGTGATCGTAAAGAATTAGAGCAGTTTATTAGAAAGCTGAATAAGC
TTGGTATTACAAAGATACAGACGAGTTTAGCACTTCGTGAAATTAAATATTCGACGGTATTACCGATACGAAATGAGGAA
CCGAGCATCGATTAG

Upstream 100 bases:

>100_bases
GTTTTGTTATGAATGATATTTAAAGAAAGATGTTCAGTTTTATATAAGTTATAAGGTGTTTTTTCGAATAATCATCGGTA
AGAAATAAGGGGGAATTATA

Downstream 100 bases:

>100_bases
ATTGCTTGGTTTTTTGTTTGTATAAAGTGATTGACGAGAAGAAAAGAGAGATGTATTATTATATAAAATTATGTATTAAA
ATTCATTTAGAGTTATAAAT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MESSVIKVLDDLDVQILDILQKESQVSNAELARRVNLSPAAMHARIKRLDGEGFIDKQVAILNQEKLGFDLLCFIFMSTN
IHQSDKLEVLEKELEAMPEVLECHCLTGEYDYLLKVANRDRKELEQFIRKLNKLGITKIQTSLALREIKYSTVLPIRNEE
PSID

Sequences:

>Translated_164_residues
MESSVIKVLDDLDVQILDILQKESQVSNAELARRVNLSPAAMHARIKRLDGEGFIDKQVAILNQEKLGFDLLCFIFMSTN
IHQSDKLEVLEKELEAMPEVLECHCLTGEYDYLLKVANRDRKELEQFIRKLNKLGITKIQTSLALREIKYSTVLPIRNEE
PSID
>Mature_164_residues
MESSVIKVLDDLDVQILDILQKESQVSNAELARRVNLSPAAMHARIKRLDGEGFIDKQVAILNQEKLGFDLLCFIFMSTN
IHQSDKLEVLEKELEAMPEVLECHCLTGEYDYLLKVANRDRKELEQFIRKLNKLGITKIQTSLALREIKYSTVLPIRNEE
PSID

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=36.4238410596026, Blast_Score=100, Evalue=4e-23,
Organism=Escherichia coli, GI1787116, Length=155, Percent_Identity=36.1290322580645, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1790182, Length=134, Percent_Identity=31.3432835820896, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18827; Mature: 18827

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSVIKVLDDLDVQILDILQKESQVSNAELARRVNLSPAAMHARIKRLDGEGFIDKQVA
CCCHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH
ILNQEKLGFDLLCFIFMSTNIHQSDKLEVLEKELEAMPEVLECHCLTGEYDYLLKVANRD
HHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
RKELEQFIRKLNKLGITKIQTSLALREIKYSTVLPIRNEEPSID
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MESSVIKVLDDLDVQILDILQKESQVSNAELARRVNLSPAAMHARIKRLDGEGFIDKQVA
CCCHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH
ILNQEKLGFDLLCFIFMSTNIHQSDKLEVLEKELEAMPEVLECHCLTGEYDYLLKVANRD
HHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
RKELEQFIRKLNKLGITKIQTSLALREIKYSTVLPIRNEEPSID
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]