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The map label for this gene is yfeT [C]

Identifier: 222094570

GI number: 222094570

Start: 888828

End: 889616

Strand: Direct

Name: yfeT [C]

Synonym: BCQ_0908

Alternate gene names: 222094570

Gene position: 888828-889616 (Clockwise)

Preceding gene: 222094569

Following gene: 222094571

Centisome position: 17.05

GC content: 38.78

Gene sequence:

>789_bases
ATGTACATAATGGAGAATGCAGAGATTGTTCCGAACTTAACGACGAAAGAAGTGTCAACGAATGCAGGTGCAAGTGAAGC
GAGTGTTGTTCGTTTTTGTAAGTCGATTGGGATTGGGAGCTTTAAAGCATTTAAAATCGCGCTCGTTCGTGAATTAACGA
TTGCTGATTATAATATTAATGATTTTTCAGTGATGAATACGGAAGATGGCCCGTACGACTTGTTTAATAAAGTTACGTAT
GTGAATAAAGCTGCAATTGAGGCGAGCGTGACGGCGATAGATAAAAAAGAACTTGAAAAAGCTGCAGATCATATTGTAAA
TGCCGATAAAATTATCTTTTACGGAGTAGGCGGATCAGCTACTCCGGCGATGGACGGAGCTTATAAATTTACAAGGCTCG
GATTTACAGCGATGATGCTATCTGATTTTCATATGATGTTGCCGCTTGTGACGAATTTAAAAGAAGGCGATATATTTGTG
GCGATTTCAACATCTGGTCGTACGAAAGATGTACTTGAAATGGCGCAATATGCGAAGAGACAGGGTGCAACAGTTATTGC
GATTACAAAGCTTGATCAATCATCACCGTTATATAAAGAGGCGGATATTCGTCTTTGTATGCCAGATGTAGAACAAGATC
ATCGTATTGCAAGTATTGCTTCAAGAATGACGCAATTGAACATGATAGATGCTCTATATGTGATTACCTTTAATCGCATT
GGTAATAAAGTGCTAGATCAATTTATGGAAACAAGAGAAGAAGCTTTGCGATTACGGAAGCTGAAATGA

Upstream 100 bases:

>100_bases
AACCGTAAGAAGTGGAGGTTAAATAGTGAAAGCTTCAACATTACTATTTAAAATTGAAAGTAATATGGATCAATTTTCAC
CAGCTGAAAAGAAGGTTGCC

Downstream 100 bases:

>100_bases
GAAGATGGGGAAACCCATCTTTTTTGCATATGGACGGACATAAATTCGTCATGAAAAGAAATTAAATTTCATAAAATAAT
AAAGTAATATTGATTTTAAA

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MYIMENAEIVPNLTTKEVSTNAGASEASVVRFCKSIGIGSFKAFKIALVRELTIADYNINDFSVMNTEDGPYDLFNKVTY
VNKAAIEASVTAIDKKELEKAADHIVNADKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSDFHMMLPLVTNLKEGDIFV
AISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEADIRLCMPDVEQDHRIASIASRMTQLNMIDALYVITFNRI
GNKVLDQFMETREEALRLRKLK

Sequences:

>Translated_262_residues
MYIMENAEIVPNLTTKEVSTNAGASEASVVRFCKSIGIGSFKAFKIALVRELTIADYNINDFSVMNTEDGPYDLFNKVTY
VNKAAIEASVTAIDKKELEKAADHIVNADKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSDFHMMLPLVTNLKEGDIFV
AISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEADIRLCMPDVEQDHRIASIASRMTQLNMIDALYVITFNRI
GNKVLDQFMETREEALRLRKLK
>Mature_262_residues
MYIMENAEIVPNLTTKEVSTNAGASEASVVRFCKSIGIGSFKAFKIALVRELTIADYNINDFSVMNTEDGPYDLFNKVTY
VNKAAIEASVTAIDKKELEKAADHIVNADKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSDFHMMLPLVTNLKEGDIFV
AISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEADIRLCMPDVEQDHRIASIASRMTQLNMIDALYVITFNRI
GNKVLDQFMETREEALRLRKLK

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=238, Percent_Identity=28.5714285714286, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788159, Length=233, Percent_Identity=32.1888412017167, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI87082369, Length=223, Percent_Identity=30.9417040358744, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI87082130, Length=236, Percent_Identity=27.5423728813559, Blast_Score=84, Evalue=8e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 29138; Mature: 29138

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIMENAEIVPNLTTKEVSTNAGASEASVVRFCKSIGIGSFKAFKIALVRELTIADYNIN
CEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHEEHHEEEEEECCCC
DFSVMNTEDGPYDLFNKVTYVNKAAIEASVTAIDKKELEKAADHIVNADKIIFYGVGGSA
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
TPAMDGAYKFTRLGFTAMMLSDFHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
QGATVIAITKLDQSSPLYKEADIRLCMPDVEQDHRIASIASRMTQLNMIDALYVITFNRI
CCCEEEEEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHH
GNKVLDQFMETREEALRLRKLK
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYIMENAEIVPNLTTKEVSTNAGASEASVVRFCKSIGIGSFKAFKIALVRELTIADYNIN
CEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHEEHHEEEEEECCCC
DFSVMNTEDGPYDLFNKVTYVNKAAIEASVTAIDKKELEKAADHIVNADKIIFYGVGGSA
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
TPAMDGAYKFTRLGFTAMMLSDFHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
QGATVIAITKLDQSSPLYKEADIRLCMPDVEQDHRIASIASRMTQLNMIDALYVITFNRI
CCCEEEEEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHH
GNKVLDQFMETREEALRLRKLK
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]