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The map label for this gene is 222094559

Identifier: 222094559

GI number: 222094559

Start: 878766

End: 879578

Strand: Reverse

Name: 222094559

Synonym: BCQ_0897

Alternate gene names: NA

Gene position: 879578-878766 (Counterclockwise)

Preceding gene: 222094567

Following gene: 222094556

Centisome position: 16.87

GC content: 32.72

Gene sequence:

>813_bases
TTGCATACCGTATGGAAAGGTGCACTTTCACTTGGACTATTAAATATAGGAATTAAACTATATAGCGCCGTAGAAGAAAA
CGACATAAAATTTTTAAGTCTCCATAAAGAATGCTTAACACCTATTAAATATAAAAAATTCGCTCCCGATTGTGCGGATG
AAAAAGTCGATGATAAAGATATTGTAAAAGCCTATGAATACGCCCCCCATAAATACATTATTATGGATGAAAAAGAATTA
GCTGCGTTGCAAAAAGCTCACGAACCACGATCTATTCGTATTATATCTTTTGTTCAAAATAACGAAATTGATTCTGTTCT
CTATGATCGTTCTTATTTTATAGGCCCTACTCCAGGACACGAAAAATCGTATCTATTATTAAAAGAAGCTCTTGAACGTA
CGAATAAACTTGGTCTTATCCATATTTCCATTAGAAAAAAACAACATTTAGCTATTATCCGTAACTTTGAAGATGGACTT
ATGTTGCAAACTATTCACTATCCTAATGAAATTCGCGATATAACAAATACACCTAACTTACCAAGTAACGAAAATTATCC
GATTCAAAAACAAGAACTCACCGCAGCAATCAACTTAATTCACCATCTTACAACCCCTTTCGAGCAAGAGTTATATACAG
ATGAATATAAAGAAGCCCTTACCGAATTAATAGAAAATAAAATTGAAGAACAGGAAAAAACAGAAACCATCTCTCCTGCT
CCAAACATCATCAATATTATGGAGACATTACAGGCAAGTATTGAACAAGCAAAAATAAAAAGAGACAATAAAACAGAAAA
AGAGGCCAAATAA

Upstream 100 bases:

>100_bases
TATATTCCAATCCCTTCTGTAAAAAACAAAAAACGTATAGGAAATTTCTTACTATCTCATAATATACATAATCATTTTTG
AATGAAAGGAGAGATTTCAT

Downstream 100 bases:

>100_bases
AATTGACCTCTTTTTCTTTAAAGCGGATTACATTTCGGCATTTCGAGTCCAGATGATTGGGCTAATTTTAATAAATAATA
ACATTCCTCTCTTGCCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MHTVWKGALSLGLLNIGIKLYSAVEENDIKFLSLHKECLTPIKYKKFAPDCADEKVDDKDIVKAYEYAPHKYIIMDEKEL
AALQKAHEPRSIRIISFVQNNEIDSVLYDRSYFIGPTPGHEKSYLLLKEALERTNKLGLIHISIRKKQHLAIIRNFEDGL
MLQTIHYPNEIRDITNTPNLPSNENYPIQKQELTAAINLIHHLTTPFEQELYTDEYKEALTELIENKIEEQEKTETISPA
PNIINIMETLQASIEQAKIKRDNKTEKEAK

Sequences:

>Translated_270_residues
MHTVWKGALSLGLLNIGIKLYSAVEENDIKFLSLHKECLTPIKYKKFAPDCADEKVDDKDIVKAYEYAPHKYIIMDEKEL
AALQKAHEPRSIRIISFVQNNEIDSVLYDRSYFIGPTPGHEKSYLLLKEALERTNKLGLIHISIRKKQHLAIIRNFEDGL
MLQTIHYPNEIRDITNTPNLPSNENYPIQKQELTAAINLIHHLTTPFEQELYTDEYKEALTELIENKIEEQEKTETISPA
PNIINIMETLQASIEQAKIKRDNKTEKEAK
>Mature_270_residues
MHTVWKGALSLGLLNIGIKLYSAVEENDIKFLSLHKECLTPIKYKKFAPDCADEKVDDKDIVKAYEYAPHKYIIMDEKEL
AALQKAHEPRSIRIISFVQNNEIDSVLYDRSYFIGPTPGHEKSYLLLKEALERTNKLGLIHISIRKKQHLAIIRNFEDGL
MLQTIHYPNEIRDITNTPNLPSNENYPIQKQELTAAINLIHHLTTPFEQELYTDEYKEALTELIENKIEEQEKTETISPA
PNIINIMETLQASIEQAKIKRDNKTEKEAK

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 31210; Mature: 31210

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTVWKGALSLGLLNIGIKLYSAVEENDIKFLSLHKECLTPIKYKKFAPDCADEKVDDKD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCHHHHHCCCCCCCCCCCHHH
IVKAYEYAPHKYIIMDEKELAALQKAHEPRSIRIISFVQNNEIDSVLYDRSYFIGPTPGH
HHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCEECCCCCCC
EKSYLLLKEALERTNKLGLIHISIRKKQHLAIIRNFEDGLMLQTIHYPNEIRDITNTPNL
CCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHEECCCCCEEEEEECCCHHHHHCCCCCCC
PSNENYPIQKQELTAAINLIHHLTTPFEQELYTDEYKEALTELIENKIEEQEKTETISPA
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PNIINIMETLQASIEQAKIKRDNKTEKEAK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHTVWKGALSLGLLNIGIKLYSAVEENDIKFLSLHKECLTPIKYKKFAPDCADEKVDDKD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCHHHHHCCCCCCCCCCCHHH
IVKAYEYAPHKYIIMDEKELAALQKAHEPRSIRIISFVQNNEIDSVLYDRSYFIGPTPGH
HHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCEECCCCCCC
EKSYLLLKEALERTNKLGLIHISIRKKQHLAIIRNFEDGLMLQTIHYPNEIRDITNTPNL
CCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHEECCCCCEEEEEECCCHHHHHCCCCCCC
PSNENYPIQKQELTAAINLIHHLTTPFEQELYTDEYKEALTELIENKIEEQEKTETISPA
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PNIINIMETLQASIEQAKIKRDNKTEKEAK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA