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The map label for this gene is oppC [C]

Identifier: 222094551

GI number: 222094551

Start: 872980

End: 873846

Strand: Direct

Name: oppC [C]

Synonym: BCQ_0889

Alternate gene names: 222094551

Gene position: 872980-873846 (Clockwise)

Preceding gene: 222094550

Following gene: 222094552

Centisome position: 16.74

GC content: 30.1

Gene sequence:

>867_bases
ATGGTCAAAAAAGTATTTTTGAATGGGATGGAAGTGACGATTCAATTTCTTATTTCGATTTTGGGTATTATTTGTTTAGG
GACATTGCCGAAACTATTTTATGGATTTGAGCTGCATGCATCACAGTACATAAAGAGTTTACAAGAAGTGTTTGTGAATT
TAATGGACATCTCCAATTTAAAATATGTGGGAGATAAATTTTTATTTCCACAGTTGTTTGTCCATTATAAAGAAACAATT
ATTATATTTTTAGCTGCTTTTTTCATTTCATTATTTGTAGCATTTTGTATTGTTTATGTAATTATGAGTAGTTCACCGCG
TATACAACATCGAATTAAATCATTTCTTATCTTCCTAGAATCCATTCCAGATATCCTTCTTATTTTAGTATCACAAATTT
TAGTTGTATGGTTTTTTAAACAAACAGGTTTTTTACCTTTTCAAATTGCTTCAATTGGAGGCGAGTCGATTAGGGGGTTG
CCAATATTGTGTTTGAGCATCCCGACTACGATTATGTTTGTAAAAATGATCGTGCTTCGTTTTGAAAATGAACTAGAAAA
AGATTATGTACTATTTGCTAAGGCGAAAGGGCTGGGGCGCTTTCATATTTTAAATCGCCATATTTTACGAAATGTGTTGC
TTAGTACATTATTCTTTGCGAAAACGAATATCTTTTTTATGTTATCTAATTTATATATTATAGAATGGATTTTTAATACG
GGTGGTATTTTTATGTTTTTGAAATCGTATTTCGGTATTAGAGTTGAGGTTTTCATTGTTAGTGTGCTTCTTATATATAT
TCCGATTTTTATTTTATTTAAATTGTTTCATTATCTCATTCCGGCTGCGATGAAGGAGAGATTATAA

Upstream 100 bases:

>100_bases
TTAGGGTCATAACCTAGCGATTTTATATATAATAAATATTTACAATTCAGAAAATTGAGAATAAAATTGAGGAGTAAATT
ATAAAGAGAGAAGGGCGAAA

Downstream 100 bases:

>100_bases
TATGTGGACGTATATAAAACGTGATAAAAGATTTTGGATAAGTATTGGGTTCCTTCTCCTATTAGTTCTTTTGAGCATCG
GAAATACGTTATGGAATGAT

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Oligopeptide Transport System Permease Protein-Like Protein

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MVKKVFLNGMEVTIQFLISILGIICLGTLPKLFYGFELHASQYIKSLQEVFVNLMDISNLKYVGDKFLFPQLFVHYKETI
IIFLAAFFISLFVAFCIVYVIMSSSPRIQHRIKSFLIFLESIPDILLILVSQILVVWFFKQTGFLPFQIASIGGESIRGL
PILCLSIPTTIMFVKMIVLRFENELEKDYVLFAKAKGLGRFHILNRHILRNVLLSTLFFAKTNIFFMLSNLYIIEWIFNT
GGIFMFLKSYFGIRVEVFIVSVLLIYIPIFILFKLFHYLIPAAMKERL

Sequences:

>Translated_288_residues
MVKKVFLNGMEVTIQFLISILGIICLGTLPKLFYGFELHASQYIKSLQEVFVNLMDISNLKYVGDKFLFPQLFVHYKETI
IIFLAAFFISLFVAFCIVYVIMSSSPRIQHRIKSFLIFLESIPDILLILVSQILVVWFFKQTGFLPFQIASIGGESIRGL
PILCLSIPTTIMFVKMIVLRFENELEKDYVLFAKAKGLGRFHILNRHILRNVLLSTLFFAKTNIFFMLSNLYIIEWIFNT
GGIFMFLKSYFGIRVEVFIVSVLLIYIPIFILFKLFHYLIPAAMKERL
>Mature_288_residues
MVKKVFLNGMEVTIQFLISILGIICLGTLPKLFYGFELHASQYIKSLQEVFVNLMDISNLKYVGDKFLFPQLFVHYKETI
IIFLAAFFISLFVAFCIVYVIMSSSPRIQHRIKSFLIFLESIPDILLILVSQILVVWFFKQTGFLPFQIASIGGESIRGL
PILCLSIPTTIMFVKMIVLRFENELEKDYVLFAKAKGLGRFHILNRHILRNVLLSTLFFAKTNIFFMLSNLYIIEWIFNT
GGIFMFLKSYFGIRVEVFIVSVLLIYIPIFILFKLFHYLIPAAMKERL

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yliabcd; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33468; Mature: 33468

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA