Click here to switch to the map view.

The map label for this gene is gerB [H]

Identifier: 222094515

GI number: 222094515

Start: 837123

End: 838232

Strand: Reverse

Name: gerB [H]

Synonym: BCQ_0853

Alternate gene names: 222094515

Gene position: 838232-837123 (Counterclockwise)

Preceding gene: 222094516

Following gene: 222094514

Centisome position: 16.08

GC content: 30.45

Gene sequence:

>1110_bases
ATGAATACAATGAATAAAGCAAAGACAGTCTCTCCATACTTTGCCTTTATATTATTACATTCGCTTCAAATTGGAATAGG
AGTTCTTGGGTATCAGCGTGTAATTTTAAAAAACGCTGGTTATGATGCCTGGATTTCTCTTATTATTGCGGGGATTACAA
CCCATATTGTGCTGTTTTGTATGTTAAAAATGTTAGAAAAAGACGGAGATTTAATTAGCATTCATACAACAACTTTTGGA
AAATGGATTGGTTCTATATTTTCCGTGATTTTCACTCTTTATTGCTTATTATTTTGCCTTACTGTTCTTCGTACATATAT
GGAAGTGATACAAGTTTGGATTTTCCCTACCATTAAATTATGGAAACTAACCTTTATGTTTTTATTAGTGACTTGCTATA
TTATAAAGGGTGGATTTCGCTCTGTAACCGGAATATGTTTTTGGGGAGTCGTTCTTCCTATTTTCGTTGTATTCTTTTTA
ATTTATCCAATGAAATACGCTCATTTCCGTAATATTTTACCTATTTTTACACATTCACCTTTTGACATGCTTATATCTGC
AAAGCAATCTGCATTAGAGTTTCTCGGCTTTGAAACAATCCTTATCTTCTATCCATTTATTGAAAAAGGTAAGTCTTTAA
AAAGATGGGCTCATGCAGGAATTTTTTTTAGCACTTTGATTTATGTAGTTTTAGCTATTGTATCTTTTATGTATTATAGT
GAAGGACAATTAAATCATACTATTTGGCCTACTTTAACGATGTTAAAAATAATTAAAGTTCCTTTCATTCAACGGTTTGA
ATATATTATTATTTTTGTTTGGTTTCTGATTATTTTGCCAAACCTTTGTTTAACTATTTGGTCATCATGCCAAACGATGA
AGCGTTCATTTCATATTTCATTTAAATTTACATTACCGTTTTTTATTTTCATCGTTTTTACAGCTTCTTTATTTTTTAAA
AACCGTGAAAGTATCAACACATTAAATACAGTACTATCTCAAGCTGGTTTATATATTGTATACGCTTATATCCCAATTTT
ATTTCTATTCCATTCAGTTCGATGGCATTTCAAAAATCGGTCAAAAAAATCTTCACCCGACACACCGTAA

Upstream 100 bases:

>100_bases
AAACAAATTCGAAATATGTATAAAAACGTAGCCGTAGATATAAATTTAGATCTTAATATTGTACAATCTGGAATCGGGGA
ATAGTGAGGTGAAATAAGCA

Downstream 100 bases:

>100_bases
TCTCTGATACAATTTGATTAATACATTTGTAAAGGGGACAAGCGAATGAAAAAGTATGTATTTTCTTTACTTGCAGTACT
GAGTTTAATTCTTGCTGGAT

Product: spore germination protein b

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MNTMNKAKTVSPYFAFILLHSLQIGIGVLGYQRVILKNAGYDAWISLIIAGITTHIVLFCMLKMLEKDGDLISIHTTTFG
KWIGSIFSVIFTLYCLLFCLTVLRTYMEVIQVWIFPTIKLWKLTFMFLLVTCYIIKGGFRSVTGICFWGVVLPIFVVFFL
IYPMKYAHFRNILPIFTHSPFDMLISAKQSALEFLGFETILIFYPFIEKGKSLKRWAHAGIFFSTLIYVVLAIVSFMYYS
EGQLNHTIWPTLTMLKIIKVPFIQRFEYIIIFVWFLIILPNLCLTIWSSCQTMKRSFHISFKFTLPFFIFIVFTASLFFK
NRESINTLNTVLSQAGLYIVYAYIPILFLFHSVRWHFKNRSKKSSPDTP

Sequences:

>Translated_369_residues
MNTMNKAKTVSPYFAFILLHSLQIGIGVLGYQRVILKNAGYDAWISLIIAGITTHIVLFCMLKMLEKDGDLISIHTTTFG
KWIGSIFSVIFTLYCLLFCLTVLRTYMEVIQVWIFPTIKLWKLTFMFLLVTCYIIKGGFRSVTGICFWGVVLPIFVVFFL
IYPMKYAHFRNILPIFTHSPFDMLISAKQSALEFLGFETILIFYPFIEKGKSLKRWAHAGIFFSTLIYVVLAIVSFMYYS
EGQLNHTIWPTLTMLKIIKVPFIQRFEYIIIFVWFLIILPNLCLTIWSSCQTMKRSFHISFKFTLPFFIFIVFTASLFFK
NRESINTLNTVLSQAGLYIVYAYIPILFLFHSVRWHFKNRSKKSSPDTP
>Mature_369_residues
MNTMNKAKTVSPYFAFILLHSLQIGIGVLGYQRVILKNAGYDAWISLIIAGITTHIVLFCMLKMLEKDGDLISIHTTTFG
KWIGSIFSVIFTLYCLLFCLTVLRTYMEVIQVWIFPTIKLWKLTFMFLLVTCYIIKGGFRSVTGICFWGVVLPIFVVFFL
IYPMKYAHFRNILPIFTHSPFDMLISAKQSALEFLGFETILIFYPFIEKGKSLKRWAHAGIFFSTLIYVVLAIVSFMYYS
EGQLNHTIWPTLTMLKIIKVPFIQRFEYIIIFVWFLIILPNLCLTIWSSCQTMKRSFHISFKFTLPFFIFIVFTASLFFK
NRESINTLNTVLSQAGLYIVYAYIPILFLFHSVRWHFKNRSKKSSPDTP

Specific function: Involved in the response to the germinative mixture of L-asparagine, glucose, fructose and potassium ions (AGFK). Could be an amino acid transporter. Cannot stimulate germination in the absence of gerD and gerK gene products (fructose and glucose receptor

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 43027; Mature: 43027

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCC
>Mature Secondary Structure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CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8012571; 9384377 [H]