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The map label for this gene is oppA [H]

Identifier: 222094410

GI number: 222094410

Start: 721765

End: 723540

Strand: Reverse

Name: oppA [H]

Synonym: BCQ_0724

Alternate gene names: 222094410

Gene position: 723540-721765 (Counterclockwise)

Preceding gene: 222094411

Following gene: 222094405

Centisome position: 13.88

GC content: 34.23

Gene sequence:

>1776_bases
ATGACAAATAAGCCAAAGTTTTTCAAAGTATTAAGTACACTTGCGGTTTCAACATTACTACTTTCAGCATGTGGGGGCAG
TGGGGGTAGTGAAAAAACGAGTAGCACAAAAAAAGTAGATACAAATAAATTTAGTGCATCTGTTAAAAATGATAAAAAGG
AAATTAAAGATGGTTCATTAACATATGGTCTTGTTTCTAACACACCATTTGAAGGACTTTTAAATTTCGCTGTATATGAA
GGGGATCCTGATAACCAAGTTATTACAATTTTCGATGAATCTTTATTATCAAATGACGAAAACTGGGAATACACGAATGA
TGGCGCTGCTACATATGAAATTTCTAAAGATAAAAAGACAATTACACTAAAAATTAAAGATAATGTAAAGTGGCATGATG
GAAACCCTGTTACTGCTGAGGATTTAGAATACTCTTATCTAGTGATTGGTAGTAAAAAATATGCTGGTTCTCGCTATGAC
ACTCAAATGCAAATGATTGAAGGTATGGAAGATTACCATAATGGAAAAGCCGAAAAAATTTCAGGTATAAAGGTAACAGA
TCCAAAAACTATTTCGATTACATTTAAAACACCAAACCCTTCAGTGAAAACTGGGCTTTGGACATACCCTCTTCATAAGA
AATACTTAGGAGATGTACCAATTGATAAATTAGCAGAATCTGATAAAATCCGTAAAAACCCAATTGGTTTCGGACCATTT
AAAGTGAAGAAAATTACGCCAGGTGAAGCTGTTGAATTTGAACGTTTTGATGATTATTATGGTGGAAAACCAAAACTGAA
AAGCATGGTTTTAAAAGTTGTTAACCCGTCCGTTGTTAACGCGTCCTTAAAAAATGGTGATATTGACATTGCTGAAGTAA
GTGCAGATCAGTATCCAAATGTAAGTAAATTAAAAAATGCTCAATTAGTCGGTAAAACTGATTTATACTATAGTTATATC
GGTTTTAAATTAGGACATATGGATAAAGAAAAAGAAGAAGTAGTAATGGATAAAGAGAAATTTAAAGATGTTCGTGTACG
TCAAGCAATGGCGTATGCTATCGATCGAAAAGAAATTGGTGAAAAATTATATCACGGCCTACGTTATCCGGCTAACTCAC
CAATCCCACCATCCCTACCAAAATATCATAACAATAAAGCTGGTTCCTATGATAAAGATGTAGAGAAAGCTAAAAAGTTA
TTAGATGAAGCGGGCTATAAAGATACGAACGGAGATGGATTCCGTGAAGATCCGAATGGTAAAGAGTTTAAAGCTAATTT
CTTATCAATGAGTGGTAGCGATGTAAGTGAACCACTTGCAAAATTCTTTATTCAATCTTGGAAAGACATCGGCCTAAAAG
TAGAGCTTCTTGATGGTCGCTTACATGAATTTAATTCATTCTACGATATGATTAAAAAAGATGATCCAAAAGTTGATCTT
TTCGCGGCAGCTTGGGGAACTGGATCTGACCCAGACCCTTCTGGTATTTGGGCTAAAGATGCAGCATTCAATTACCCACG
TTGGGCTACTGACAAAAACACAGAATTATTAAAACAAGGTATTTCTCCAGAAGCTGCTGATGAAAAATACCGTAAAGATG
TCTACGATAAATGGCAAAAATTAGTTCACGATGAAGTACCATTAATTCCACTTCATTATAAATTTGACTTAAAAGGTGTA
AATAATCGCGTAAAAGATTATAAATACACACCAGAAGATCAATATAAATGGGGTAAGGTTAGCGTAACAAGCGATAAAGC
AGAAACAGAGAAATAA

Upstream 100 bases:

>100_bases
AATCATGATTTTAACATTGATGCTGTGTATAAATTTTATTGGTCAAGCGCTACGTCGTTCGGCCGATGCAAGACAAAGAA
AAGGATAAGGGGTGGAAGAA

Downstream 100 bases:

>100_bases
TAAAATAGCTCCCGGCACTGAGATACATGCCAGGAGCTATTTTTTATTTACAATCCTTTTCTTACTATTTATAACAACCA
ATTCCTTCCCTACTCTAAGG

Product: oligopeptide ABC transporter substrate-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 590

Protein sequence:

>591_residues
MTNKPKFFKVLSTLAVSTLLLSACGGSGGSEKTSSTKKVDTNKFSASVKNDKKEIKDGSLTYGLVSNTPFEGLLNFAVYE
GDPDNQVITIFDESLLSNDENWEYTNDGAATYEISKDKKTITLKIKDNVKWHDGNPVTAEDLEYSYLVIGSKKYAGSRYD
TQMQMIEGMEDYHNGKAEKISGIKVTDPKTISITFKTPNPSVKTGLWTYPLHKKYLGDVPIDKLAESDKIRKNPIGFGPF
KVKKITPGEAVEFERFDDYYGGKPKLKSMVLKVVNPSVVNASLKNGDIDIAEVSADQYPNVSKLKNAQLVGKTDLYYSYI
GFKLGHMDKEKEEVVMDKEKFKDVRVRQAMAYAIDRKEIGEKLYHGLRYPANSPIPPSLPKYHNNKAGSYDKDVEKAKKL
LDEAGYKDTNGDGFREDPNGKEFKANFLSMSGSDVSEPLAKFFIQSWKDIGLKVELLDGRLHEFNSFYDMIKKDDPKVDL
FAAAWGTGSDPDPSGIWAKDAAFNYPRWATDKNTELLKQGISPEAADEKYRKDVYDKWQKLVHDEVPLIPLHYKFDLKGV
NNRVKDYKYTPEDQYKWGKVSVTSDKAETEK

Sequences:

>Translated_591_residues
MTNKPKFFKVLSTLAVSTLLLSACGGSGGSEKTSSTKKVDTNKFSASVKNDKKEIKDGSLTYGLVSNTPFEGLLNFAVYE
GDPDNQVITIFDESLLSNDENWEYTNDGAATYEISKDKKTITLKIKDNVKWHDGNPVTAEDLEYSYLVIGSKKYAGSRYD
TQMQMIEGMEDYHNGKAEKISGIKVTDPKTISITFKTPNPSVKTGLWTYPLHKKYLGDVPIDKLAESDKIRKNPIGFGPF
KVKKITPGEAVEFERFDDYYGGKPKLKSMVLKVVNPSVVNASLKNGDIDIAEVSADQYPNVSKLKNAQLVGKTDLYYSYI
GFKLGHMDKEKEEVVMDKEKFKDVRVRQAMAYAIDRKEIGEKLYHGLRYPANSPIPPSLPKYHNNKAGSYDKDVEKAKKL
LDEAGYKDTNGDGFREDPNGKEFKANFLSMSGSDVSEPLAKFFIQSWKDIGLKVELLDGRLHEFNSFYDMIKKDDPKVDL
FAAAWGTGSDPDPSGIWAKDAAFNYPRWATDKNTELLKQGISPEAADEKYRKDVYDKWQKLVHDEVPLIPLHYKFDLKGV
NNRVKDYKYTPEDQYKWGKVSVTSDKAETEK
>Mature_590_residues
TNKPKFFKVLSTLAVSTLLLSACGGSGGSEKTSSTKKVDTNKFSASVKNDKKEIKDGSLTYGLVSNTPFEGLLNFAVYEG
DPDNQVITIFDESLLSNDENWEYTNDGAATYEISKDKKTITLKIKDNVKWHDGNPVTAEDLEYSYLVIGSKKYAGSRYDT
QMQMIEGMEDYHNGKAEKISGIKVTDPKTISITFKTPNPSVKTGLWTYPLHKKYLGDVPIDKLAESDKIRKNPIGFGPFK
VKKITPGEAVEFERFDDYYGGKPKLKSMVLKVVNPSVVNASLKNGDIDIAEVSADQYPNVSKLKNAQLVGKTDLYYSYIG
FKLGHMDKEKEEVVMDKEKFKDVRVRQAMAYAIDRKEIGEKLYHGLRYPANSPIPPSLPKYHNNKAGSYDKDVEKAKKLL
DEAGYKDTNGDGFREDPNGKEFKANFLSMSGSDVSEPLAKFFIQSWKDIGLKVELLDGRLHEFNSFYDMIKKDDPKVDLF
AAAWGTGSDPDPSGIWAKDAAFNYPRWATDKNTELLKQGISPEAADEKYRKDVYDKWQKLVHDEVPLIPLHYKFDLKGVN
NRVKDYKYTPEDQYKWGKVSVTSDKAETEK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=497, Percent_Identity=23.7424547283702, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789397, Length=529, Percent_Identity=24.3856332703214, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1787052, Length=471, Percent_Identity=23.5668789808917, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1789887, Length=463, Percent_Identity=23.7580993520518, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787495, Length=509, Percent_Identity=24.3614931237721, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081878, Length=511, Percent_Identity=24.4618395303327, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787551, Length=411, Percent_Identity=19.9513381995134, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 66629; Mature: 66498

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKPKFFKVLSTLAVSTLLLSACGGSGGSEKTSSTKKVDTNKFSASVKNDKKEIKDGSL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCE
TYGLVSNTPFEGLLNFAVYEGDPDNQVITIFDESLLSNDENWEYTNDGAATYEISKDKKT
EEEEECCCCHHHHEEEEEEECCCCCCEEEEEEHHHHCCCCCCEEECCCCEEEEECCCCEE
ITLKIKDNVKWHDGNPVTAEDLEYSYLVIGSKKYAGSRYDTQMQMIEGMEDYHNGKAEKI
EEEEEECCEEEECCCCCCHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEE
SGIKVTDPKTISITFKTPNPSVKTGLWTYPLHKKYLGDVPIDKLAESDKIRKNPIGFGPF
CCEEECCCEEEEEEEECCCCCCCCCEEECCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCE
KVKKITPGEAVEFERFDDYYGGKPKLKSMVLKVVNPSVVNASLKNGDIDIAEVSADQYPN
EEEEECCCCCEEHHHHHHHCCCCHHHHHHHHHHHCCHHEEEECCCCCEEEEECCCCCCCC
VSKLKNAQLVGKTDLYYSYIGFKLGHMDKEKEEVVMDKEKFKDVRVRQAMAYAIDRKEIG
HHHHCCCEEECCCHHHHHHHHEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
EKLYHGLRYPANSPIPPSLPKYHNNKAGSYDKDVEKAKKLLDEAGYKDTNGDGFREDPNG
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KEFKANFLSMSGSDVSEPLAKFFIQSWKDIGLKVELLDGRLHEFNSFYDMIKKDDPKVDL
CCEEEHEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCEEE
FAAAWGTGSDPDPSGIWAKDAAFNYPRWATDKNTELLKQGISPEAADEKYRKDVYDKWQK
EEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH
LVHDEVPLIPLHYKFDLKGVNNRVKDYKYTPEDQYKWGKVSVTSDKAETEK
HHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
TNKPKFFKVLSTLAVSTLLLSACGGSGGSEKTSSTKKVDTNKFSASVKNDKKEIKDGSL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCE
TYGLVSNTPFEGLLNFAVYEGDPDNQVITIFDESLLSNDENWEYTNDGAATYEISKDKKT
EEEEECCCCHHHHEEEEEEECCCCCCEEEEEEHHHHCCCCCCEEECCCCEEEEECCCCEE
ITLKIKDNVKWHDGNPVTAEDLEYSYLVIGSKKYAGSRYDTQMQMIEGMEDYHNGKAEKI
EEEEEECCEEEECCCCCCHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEE
SGIKVTDPKTISITFKTPNPSVKTGLWTYPLHKKYLGDVPIDKLAESDKIRKNPIGFGPF
CCEEECCCEEEEEEEECCCCCCCCCEEECCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCE
KVKKITPGEAVEFERFDDYYGGKPKLKSMVLKVVNPSVVNASLKNGDIDIAEVSADQYPN
EEEEECCCCCEEHHHHHHHCCCCHHHHHHHHHHHCCHHEEEECCCCCEEEEECCCCCCCC
VSKLKNAQLVGKTDLYYSYIGFKLGHMDKEKEEVVMDKEKFKDVRVRQAMAYAIDRKEIG
HHHHCCCEEECCCHHHHHHHHEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
EKLYHGLRYPANSPIPPSLPKYHNNKAGSYDKDVEKAKKLLDEAGYKDTNGDGFREDPNG
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KEFKANFLSMSGSDVSEPLAKFFIQSWKDIGLKVELLDGRLHEFNSFYDMIKKDDPKVDL
CCEEEHEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCEEE
FAAAWGTGSDPDPSGIWAKDAAFNYPRWATDKNTELLKQGISPEAADEKYRKDVYDKWQK
EEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH
LVHDEVPLIPLHYKFDLKGVNNRVKDYKYTPEDQYKWGKVSVTSDKAETEK
HHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8244921 [H]