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The map label for this gene is fdhD [H]

Identifier: 222094340

GI number: 222094340

Start: 645176

End: 645982

Strand: Reverse

Name: fdhD [H]

Synonym: BCQ_0654

Alternate gene names: 222094340

Gene position: 645982-645176 (Counterclockwise)

Preceding gene: 222094348

Following gene: 222094339

Centisome position: 12.39

GC content: 32.84

Gene sequence:

>807_bases
ATGGGGCCTACGCAAGAGACTTATACAATTGTACGTTATCAATCTGGTACATTTTCAAAACAACTTGATGAGATTGTTAC
AGAATCTCCTATTACTATTAAATTGAATGGTGAAGAATATGTAACAGTCGTATGTACACCAAATTATATTGAAGATATGG
TAATTGGTTTTTTAATTTCTGAGGGGATTATTTCTTCCTATAAAGATATTGAAGAACTATGGGTTCAAAAAGATAACGGA
ATTGTCCATGTAACATCATCAAAAATAAATCCGCTCTATCAAAATTTATATAATAAACGATACATCACTTCTTGCTGCGG
AAAAGGTAGACAAGGTTTTATTTTCGTTAACGATGCAGCAAAAGCAAAAGATTTACATGATATACATGTAAAAATTACTC
CTGAAGAATGCTTTTACTTAATGAATACTTTACAACAATCTTCCACTACCTTTCGACAAACCGGTGGTGTTCACAATACC
GCGCTATGTGATCGAAACAATATCCTCCTATCAAGAATGGATATTGGAAGACATAATGCATTAGATAAAATATATGGACA
TTGTTTACGCAACGATATATCTGTTAAAGGAAAAATCATTGCATTTAGCGGGCGTATTTCATCCGAAATTTTACTCAAAG
TTTCAAAAATCGGATGTGAAATTGTTCTATCTAAATCCGCACCAACAAAACTAGCATTGCAACTCGCTCACGATTTAGGC
ATTACAGTCGTAGGATTTATTAGAAATGACTCTTGTAATATTTACACGCATCCACATCGAATTGATGGTTATCAATCGAA
TAACTAA

Upstream 100 bases:

>100_bases
AACCAAAATAATCTGATACCTTCCTTCTAACAGCTGTTTTTATTTTTTCAATGTTTTATGATGAATGTGGGAGAAAATAC
ATATAAAAGGGGAATTTAAT

Downstream 100 bases:

>100_bases
AATAACTCCTCAATCGAGGAGTTATTTTAGTTATAAAAATGTAATATATTAAACACTTGAATAGTTAATAAAGTTAATAT
ATAATTTCATTACATATTAA

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MGPTQETYTIVRYQSGTFSKQLDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLISEGIISSYKDIEELWVQKDNG
IVHVTSSKINPLYQNLYNKRYITSCCGKGRQGFIFVNDAAKAKDLHDIHVKITPEECFYLMNTLQQSSTTFRQTGGVHNT
ALCDRNNILLSRMDIGRHNALDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAPTKLALQLAHDLG
ITVVGFIRNDSCNIYTHPHRIDGYQSNN

Sequences:

>Translated_268_residues
MGPTQETYTIVRYQSGTFSKQLDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLISEGIISSYKDIEELWVQKDNG
IVHVTSSKINPLYQNLYNKRYITSCCGKGRQGFIFVNDAAKAKDLHDIHVKITPEECFYLMNTLQQSSTTFRQTGGVHNT
ALCDRNNILLSRMDIGRHNALDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAPTKLALQLAHDLG
ITVVGFIRNDSCNIYTHPHRIDGYQSNN
>Mature_267_residues
GPTQETYTIVRYQSGTFSKQLDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLISEGIISSYKDIEELWVQKDNGI
VHVTSSKINPLYQNLYNKRYITSCCGKGRQGFIFVNDAAKAKDLHDIHVKITPEECFYLMNTLQQSSTTFRQTGGVHNTA
LCDRNNILLSRMDIGRHNALDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAPTKLALQLAHDLGI
TVVGFIRNDSCNIYTHPHRIDGYQSNN

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=253, Percent_Identity=28.8537549407115, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30070; Mature: 29939

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPTQETYTIVRYQSGTFSKQLDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLIS
CCCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHH
EGIISSYKDIEELWVQKDNGIVHVTSSKINPLYQNLYNKRYITSCCGKGRQGFIFVNDAA
HHHHHHHHHHHHHHEECCCCEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCEEEEEECCC
KAKDLHDIHVKITPEECFYLMNTLQQSSTTFRQTGGVHNTALCDRNNILLSRMDIGRHNA
CCCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCEEEEEECCCCCHH
LDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAPTKLALQLAHDLG
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHEEEECCCEEEEEECCCCHHHHHHHHHCCC
ITVVGFIRNDSCNIYTHPHRIDGYQSNN
EEEEEEEECCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
GPTQETYTIVRYQSGTFSKQLDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLIS
CCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHH
EGIISSYKDIEELWVQKDNGIVHVTSSKINPLYQNLYNKRYITSCCGKGRQGFIFVNDAA
HHHHHHHHHHHHHHEECCCCEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCEEEEEECCC
KAKDLHDIHVKITPEECFYLMNTLQQSSTTFRQTGGVHNTALCDRNNILLSRMDIGRHNA
CCCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCEEEEEECCCCCHH
LDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAPTKLALQLAHDLG
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHEEEECCCEEEEEECCCCHHHHHHHHHCCC
ITVVGFIRNDSCNIYTHPHRIDGYQSNN
EEEEEEEECCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA