Click here to switch to the map view.

The map label for this gene is ugpA [H]

Identifier: 222094319

GI number: 222094319

Start: 621833

End: 622765

Strand: Direct

Name: ugpA [H]

Synonym: BCQ_0633

Alternate gene names: 222094319

Gene position: 621833-622765 (Clockwise)

Preceding gene: 222094318

Following gene: 222094320

Centisome position: 11.93

GC content: 33.65

Gene sequence:

>933_bases
ATGATTGAAGTAGGCAAGTTACCAGCCCAAGCAAAGGTGGCAAAAAAGAAGAATTTATGGAGTAGAACGAAAGATTTAAG
AATAGGATTATTATTTTTAGCGCCATCTATTTTATTGTTCTCGATTTTTCTTTTTTATCCATTATTTAGGACGATTTACT
ATAGCTTTTATTTAACAGATATACACGGAGAAGCTAATCTTTTCGTTGGCTTAGAAAATTATCAATACTTATTTTCTGAT
CCTGCTTTCTACAAAAGCATAAAGTCAACTTTATTATTTGTTGTATATACAGTGCCTACGAGTATTATACTCGCTTTATT
TCTTGCATTGATTGCAAATGGAAAAGTAAGAGGTATTGGGGTATTCCGTGTGTTATTTTCTTCCACAATGGGAATATCAG
TAGCTGCTAGTGCAGTGATTTGGTTATTTTTATTTCATCCAAGTGTCGGGTTATTCAATAATATATTAGCTTCTATGAAT
CTTCCTGCAATTGCATGGTTAACGAGTCCGGACTGGGCACTATTCTCTGTATCAGTTACAACGGTTTGGGTGAATACAGG
ATTTGCATTTTTAGTTATATTAGGTGGTTTACAAAACATTGATACGTCTTTATATGAGAGTGCATCTATAGATGGTGCTA
GCTATTTATATAAGCTTCGTCGTGTTACATTACCGATGTTATCACCAACTTTATTCTTTATCGTGACAGTAACGTTAATT
AGTGCGTTCCAAAGCTTTGGACAGATTGATATTTTAACGCACGGTGGACCGAATGATGCAACAAATTTAATTGTATATTC
GATTTATAAAGAGGCATTTGTGAATCATCAATTTGGGACAGCAAGTGCACAAGCGATGGTACTATTTGTTTTCATTTTCA
TTGCTACATTACTTCAATTTAAGTTTGCTGAGAGAAAGGTGCATTATAAATGA

Upstream 100 bases:

>100_bases
AATTATTATTCTCACAAGATAAGTTATGCTTCTTTCATCAAAATACGAATGAACGATTAAAAGTGGTAGCTGAAGAAGAG
TTGAAAGTGGTGGCGAAATA

Downstream 100 bases:

>100_bases
TCGTTAAACAGTGGAAACAAAATTTCCTGCTATACATGCTGCTCATAATTAGTGCAGTAATGGTATTTTTTCCTGTGCTG
TATGCGTTTTTAATAAGCTT

Product: glycerol-3-phosphate ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIEVGKLPAQAKVAKKKNLWSRTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTDIHGEANLFVGLENYQYLFSD
PAFYKSIKSTLLFVVYTVPTSIILALFLALIANGKVRGIGVFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMN
LPAIAWLTSPDWALFSVSVTTVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFIATLLQFKFAERKVHYK

Sequences:

>Translated_310_residues
MIEVGKLPAQAKVAKKKNLWSRTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTDIHGEANLFVGLENYQYLFSD
PAFYKSIKSTLLFVVYTVPTSIILALFLALIANGKVRGIGVFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMN
LPAIAWLTSPDWALFSVSVTTVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFIATLLQFKFAERKVHYK
>Mature_310_residues
MIEVGKLPAQAKVAKKKNLWSRTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTDIHGEANLFVGLENYQYLFSD
PAFYKSIKSTLLFVVYTVPTSIILALFLALIANGKVRGIGVFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMN
LPAIAWLTSPDWALFSVSVTTVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFIATLLQFKFAERKVHYK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=289, Percent_Identity=32.5259515570934, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=30, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=25.9842519685039, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34654; Mature: 34654

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVGKLPAQAKVAKKKNLWSRTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTD
CCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
IHGEANLFVGLENYQYLFSDPAFYKSIKSTLLFVVYTVPTSIILALFLALIANGKVRGIG
ECCCCEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
VFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMNLPAIAWLTSPDWALFSVSVT
HHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEE
TVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
EEEEECCHHHHHHHCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFIATLLQF
HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KFAERKVHYK
HHHHHHCCCC
>Mature Secondary Structure
MIEVGKLPAQAKVAKKKNLWSRTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTD
CCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
IHGEANLFVGLENYQYLFSDPAFYKSIKSTLLFVVYTVPTSIILALFLALIANGKVRGIG
ECCCCEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
VFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMNLPAIAWLTSPDWALFSVSVT
HHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEE
TVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
EEEEECCHHHHHHHCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFIATLLQF
HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KFAERKVHYK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA