Click here to switch to the map view.

The map label for this gene is rapA [H]

Identifier: 222094288

GI number: 222094288

Start: 581509

End: 582603

Strand: Reverse

Name: rapA [H]

Synonym: BCQ_0601

Alternate gene names: 222094288

Gene position: 582603-581509 (Counterclockwise)

Preceding gene: 222094301

Following gene: 222094287

Centisome position: 11.17

GC content: 31.51

Gene sequence:

>1095_bases
ATGGGTGTTCCAGTGAAGGGGAATGAACAGATTTCAAAGTTATTTAATGACTGGTATCAAGCTATACTACAACATCAAAA
TGTACAAGCAACAAACTTAAAACAAGAAGTTGAAGATAAACTTTCCACTATAAAAGAAGATAAAAATTTATTATTATACT
ATTCATTATTAGACTTTAGATATAAAGTGCTAACCGATGGACTTAACATTACAAAAGATAGCTTTAATGAAATTAACTCC
TTTGATGTACCTGATAGCGGCTTTTTATCTTATTATTATCACTTCTTTAAAGGCATTCATGAAGCGATGGTTTCAAATTA
CACTAAAGCGAGAGAAGAATTTGAACAAGCGGAAAAACTTTTAATGTATGCACTGAATGAATTAGAGGAAGCTGAATTTA
ATTATCGCATTGCTTCATTCCACTATCAAACATACCAACCTTTAGTTGCAATTCAATATGTAACGAAGGCAAAGGATATT
TTTTCTAAACATATGGGATATGAAGTTAATGTAGCTTCCTGTGACAATGTTTATGGGCTATCTTGCATAGATTTAAAACA
ATTTGAACAAGCGGAAATCAATCTAAATTCTGCGTTAGATATTCTACAAAAACACAATGAAGAATCTCTAGTCCTTAGAG
TACGACACAACTTAGCTTGGTTATACGCGAATCAAAATCTTTCAAGTTTAGCAATTCGACATGTATCCGAAGTGACGAAA
AAGAACCCTAAACATTTCAAAGCTATTTTTGTAGAAGCACGTGAGTATTATAAATTAGGCGAACATACTCTTGCCGAAGA
ATTGATTGAAAACGGTCTACGTATTTGTAATGAACTTGAAAACAAAGAACTTCTACCCCATTTTATGATTCTAAAAGAAC
TAAATAATAAAACTTCCGCATTATCTTTAGAAAAAGTAATTTTAGAAGGGATTTCTTACTTTAAAAAAGAAAAACTATGG
GACTGCGTGCAAGAATACACTGAGATTCTAGCAAACGCATTCTACCAAGAAGAAAATCATGTACAAGCTAGTAAGTATTT
TTATATGAGTAATGAAGCAAGGAGAAAATATGAAGAAAAAGGGGCGTTAAAGTAA

Upstream 100 bases:

>100_bases
ATTGTCAAACAAATGTTGAGAAATATCGAAATTCAATTTCCATTATATTCTATTCTTGCTATTATTTAATGTAAGACTAT
TCAGAAAAGGAAGGGATTAC

Downstream 100 bases:

>100_bases
TGAAAAAGCTTGGATTAACAATAGCAGGGTTAGCTGTATTAGGAATTACGTCTTTAGGATTAGGACATACGAATGAAATA
GCAAAAACGAAACAAAAACT

Product: response regulator aspartate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MGVPVKGNEQISKLFNDWYQAILQHQNVQATNLKQEVEDKLSTIKEDKNLLLYYSLLDFRYKVLTDGLNITKDSFNEINS
FDVPDSGFLSYYYHFFKGIHEAMVSNYTKAREEFEQAEKLLMYALNELEEAEFNYRIASFHYQTYQPLVAIQYVTKAKDI
FSKHMGYEVNVASCDNVYGLSCIDLKQFEQAEINLNSALDILQKHNEESLVLRVRHNLAWLYANQNLSSLAIRHVSEVTK
KNPKHFKAIFVEAREYYKLGEHTLAEELIENGLRICNELENKELLPHFMILKELNNKTSALSLEKVILEGISYFKKEKLW
DCVQEYTEILANAFYQEENHVQASKYFYMSNEARRKYEEKGALK

Sequences:

>Translated_364_residues
MGVPVKGNEQISKLFNDWYQAILQHQNVQATNLKQEVEDKLSTIKEDKNLLLYYSLLDFRYKVLTDGLNITKDSFNEINS
FDVPDSGFLSYYYHFFKGIHEAMVSNYTKAREEFEQAEKLLMYALNELEEAEFNYRIASFHYQTYQPLVAIQYVTKAKDI
FSKHMGYEVNVASCDNVYGLSCIDLKQFEQAEINLNSALDILQKHNEESLVLRVRHNLAWLYANQNLSSLAIRHVSEVTK
KNPKHFKAIFVEAREYYKLGEHTLAEELIENGLRICNELENKELLPHFMILKELNNKTSALSLEKVILEGISYFKKEKLW
DCVQEYTEILANAFYQEENHVQASKYFYMSNEARRKYEEKGALK
>Mature_363_residues
GVPVKGNEQISKLFNDWYQAILQHQNVQATNLKQEVEDKLSTIKEDKNLLLYYSLLDFRYKVLTDGLNITKDSFNEINSF
DVPDSGFLSYYYHFFKGIHEAMVSNYTKAREEFEQAEKLLMYALNELEEAEFNYRIASFHYQTYQPLVAIQYVTKAKDIF
SKHMGYEVNVASCDNVYGLSCIDLKQFEQAEINLNSALDILQKHNEESLVLRVRHNLAWLYANQNLSSLAIRHVSEVTKK
NPKHFKAIFVEAREYYKLGEHTLAEELIENGLRICNELENKELLPHFMILKELNNKTSALSLEKVILEGISYFKKEKLWD
CVQEYTEILANAFYQEENHVQASKYFYMSNEARRKYEEKGALK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 42715; Mature: 42584

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVPVKGNEQISKLFNDWYQAILQHQNVQATNLKQEVEDKLSTIKEDKNLLLYYSLLDFR
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH
YKVLTDGLNITKDSFNEINSFDVPDSGFLSYYYHFFKGIHEAMVSNYTKAREEFEQAEKL
HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMYALNELEEAEFNYRIASFHYQTYQPLVAIQYVTKAKDIFSKHMGYEVNVASCDNVYGL
HHHHHHHHHHHHCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
SCIDLKQFEQAEINLNSALDILQKHNEESLVLRVRHNLAWLYANQNLSSLAIRHVSEVTK
CEECHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHH
KNPKHFKAIFVEAREYYKLGEHTLAEELIENGLRICNELENKELLPHFMILKELNNKTSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH
LSLEKVILEGISYFKKEKLWDCVQEYTEILANAFYQEENHVQASKYFYMSNEARRKYEEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCHHHHHHHHC
GALK
CCCC
>Mature Secondary Structure 
GVPVKGNEQISKLFNDWYQAILQHQNVQATNLKQEVEDKLSTIKEDKNLLLYYSLLDFR
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH
YKVLTDGLNITKDSFNEINSFDVPDSGFLSYYYHFFKGIHEAMVSNYTKAREEFEQAEKL
HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMYALNELEEAEFNYRIASFHYQTYQPLVAIQYVTKAKDIFSKHMGYEVNVASCDNVYGL
HHHHHHHHHHHHCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
SCIDLKQFEQAEINLNSALDILQKHNEESLVLRVRHNLAWLYANQNLSSLAIRHVSEVTK
CEECHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHH
KNPKHFKAIFVEAREYYKLGEHTLAEELIENGLRICNELENKELLPHFMILKELNNKTSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH
LSLEKVILEGISYFKKEKLWDCVQEYTEILANAFYQEENHVQASKYFYMSNEARRKYEEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCHHHHHHHHC
GALK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]