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The map label for this gene is yrdR [H]

Identifier: 222093973

GI number: 222093973

Start: 206846

End: 207814

Strand: Direct

Name: yrdR [H]

Synonym: BCQ_0229

Alternate gene names: 222093973

Gene position: 206846-207814 (Clockwise)

Preceding gene: 222093969

Following gene: 222093974

Centisome position: 3.97

GC content: 34.26

Gene sequence:

>969_bases
GTGAGAAAAGGTCAAATGATAATAGGCGCTTTAGCGTGTTTAATTGCAAGTATGTCATGGGGAGCAATGTTTCCAGTTGC
TGATCATGCGTTAGAATACATAGATCCATTTTACTTTTCGCTTATTCGCTATGGAGCGGTGGTGATAATGCTGATTATAT
TGTTGTTAATGAAAGAAGGGAAACAGGCATTTCGTTTAGAAGGAAGAGGAAAGTTACTCGTCTTTTTCGGAACGATGGCG
TTTACTGTATATAATGTACTTATATTTTTAGGTCAAATGTTAATGGGAAAATCAGGCGTGATGGTAGCCTCCATTATGGA
AGCACTTATGCCGATGATTTCTATTTGTATCCTATGGGGATATAAGCGTGTAAAACCGAAAAAGTATATGATAACGAGCA
TGATTATCGCTTTTATAGGGGCTGTATTTGTTATTACAAAAGGTGATATGAGTTTCTTTTTAACATTGAAAGATAACATG
TTTTCACTAGCATGTATATTTGTTGGAGTTGTAGGTTGGGTTATTTATACGATGGGTGGTCAAACGTGTAGCGATTGGTC
GACATTACGTTACTCTACATTGACGTGTGTATTCGGTACAACCGTTACAGGAATTATAACGATAATTATAACGGCGTTTG
GATATGTTTCAGTTCCGAGTATGGGAACGATTTTTATTGTGAAATACGATTTATTATTTATGATGACATTACCAGGAATA
GTAGCGTTACTAGCTTGGAACTATGGTGTGAAAATTTTATCGTCCATTAATGGGATTTTATTTATTAATTTTGTACCAAT
TACAACTTTAGTTATTATGATGATGCAAGGATATCAAATAACAATGTTTGATATTGTAGGGACTTTACTTGTTATTGCGG
CACTTATTCGTAATAATGTTTGTCAGAGGAAAGAAGAAAATATAAATAAGAAGATTTTACAAGAAGAGCAATTACGTCAA
GCTGTTTAA

Upstream 100 bases:

>100_bases
CATTATAAATGATAGTTAACATCATTTCGAATCATTTTACGTGATATATTTTTTCTTTTACAATTCTCTTTGTGCAAATA
GAAAGAAGTGGGGGATTGCG

Downstream 100 bases:

>100_bases
TAGGCAATTGGAGGATTTCACATGTTAGAAAGTTTATTGTTTTTCTTTGCCGTCGGAGTTGCTTGTGAGCTTGCAGCAAT
TAATCGAAATGGTCGTAAGA

Product: transporter, eama family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MRKGQMIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVVIMLIILLLMKEGKQAFRLEGRGKLLVFFGTMA
FTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKRVKPKKYMITSMIIAFIGAVFVITKGDMSFFLTLKDNM
FSLACIFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPSMGTIFIVKYDLLFMMTLPGI
VALLAWNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLLVIAALIRNNVCQRKEENINKKILQEEQLRQ
AV

Sequences:

>Translated_322_residues
MRKGQMIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVVIMLIILLLMKEGKQAFRLEGRGKLLVFFGTMA
FTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKRVKPKKYMITSMIIAFIGAVFVITKGDMSFFLTLKDNM
FSLACIFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPSMGTIFIVKYDLLFMMTLPGI
VALLAWNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLLVIAALIRNNVCQRKEENINKKILQEEQLRQ
AV
>Mature_322_residues
MRKGQMIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVVIMLIILLLMKEGKQAFRLEGRGKLLVFFGTMA
FTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKRVKPKKYMITSMIIAFIGAVFVITKGDMSFFLTLKDNM
FSLACIFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPSMGTIFIVKYDLLFMMTLPGI
VALLAWNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLLVIAALIRNNVCQRKEENINKKILQEEQLRQ
AV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35945; Mature: 35945

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGQMIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVVIMLIILLLMKEG
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KQAFRLEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWG
CHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
YKRVKPKKYMITSMIIAFIGAVFVITKGDMSFFLTLKDNMFSLACIFVGVVGWVIYTMGG
HHHCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
QTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPSMGTIFIVKYDLLFMMTLPGI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH
VALLAWNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLLVIAALIRNNV
HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
CQRKEENINKKILQEEQLRQAV
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKGQMIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVVIMLIILLLMKEG
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KQAFRLEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWG
CHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
YKRVKPKKYMITSMIIAFIGAVFVITKGDMSFFLTLKDNMFSLACIFVGVVGWVIYTMGG
HHHCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
QTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPSMGTIFIVKYDLLFMMTLPGI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH
VALLAWNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLLVIAALIRNNV
HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
CQRKEENINKKILQEEQLRQAV
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]