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The map label for this gene is ybbR [H]

Identifier: 222093925

GI number: 222093925

Start: 154387

End: 155874

Strand: Direct

Name: ybbR [H]

Synonym: BCQ_0181

Alternate gene names: 222093925

Gene position: 154387-155874 (Clockwise)

Preceding gene: 222093924

Following gene: 222093926

Centisome position: 2.96

GC content: 36.42

Gene sequence:

>1488_bases
ATGGATAAGTTAATGGAGAATCATTGGTTTTTAAAGGGGATCTCATTACTATTGGCGTGTATGCTTTTTATGTCAGCGAC
TTTAACTGAAAAAAATACGACATCGGGGATACTACCTTTTGCAAATGATGCGAAAGAAACATTAACTAATTATGCTATTA
ACGTTAAGTATGATGAAGAGAAATATATTGTAAGTGGTATTCCGGCAGAGGGCGTTAAGGTGAAGTTAGAGGGTCCAAAA
GCAGCAGTTGCTACGGCAAAAGCGAAAAAACAATTTGATATACCAGTTGATTTGAGAGGTAGCGAAAAAGGAACGTATGA
AGTTTCTTTGAAAACGAATGGACTTCCAGATGATGTGAAAGGAACAGTTCAGCCATCAACAATTAAAATTACTCTTCATG
AAAAAGCGAGAAAATATGTTCATGTAGACTTGAAATTATCAAATGAGGATCAAATGCCAGCTGGTGCTACTCTCGAAAAA
TCAAACATTAAACCTGATACGGTTGAGGTAGTTGGGACGAAAGAAGAAATTGAAAGTATTTCATCTGCTAAGGCGTATGT
TGATTTAAAAGGTGTTAATAAAACTGTTACAAAAACAGCCGAAGTTACATTATACAATAAAGAAGGAAAACGTTTAAATG
TAAGAACAAGTCCATCTAAAATTAGTGTAACGTTGAATGTGGCGACGCAAGCTACGGCCAATAATACTGAAAAAACTGTT
CCTATAACATATGCGAAAAAGGGGAGTTTACCGGAAGGATTGGCCGTTACAAATATTAGCGTTGAGCCGAGAGAAGTCAC
GATAGCAGGTCCAAAAGATATATTGGATAATATACAATCGATAGAGGGGGTCGAAGTAGATCTTAGTCAATTGACAGAGT
CTACAACATTCGATACCTCTGTTTTATTACCAAAGGGTGTAACAAGTGCGAAGCCAAATCAAGTAAAGGTTTCAGTAGGC
GTACAAAAAACAAAACAAACGAAAACAAGAACGATTGATGGTATATCAATTCAAAAAAATGGACTTTCTAAAGACGTTAC
GGCCCAGTTACTTTCGCCGCAAGATGGGAAGATAAGCGTTGATATTTCAGGAGAAACAAGTATAGTAGATAAAATAACAG
CTGCTCAAATAACAGCAGTGATTAATCTACAAAATGTGTCTCCTGGGACGAAGGATGTTGCGATTCAAGTGAGTGGCCCT
GGTAATATTTCAATAGAGCCAAAACAAAAAAGTGCTAAAGTTACAATTGTGAAGAAAGAAAATCCCGATAAAGAAGTACA
GGGTAACGGTGAGCAACCAAATTCAAATAATAATAAAGATAATCAAACTGAAACACCAAAAAATCCTGAACCTGAACCTA
AGCCTGATCCAGAAAAGGAAAAGGAAAAGGAGAAGGAATCGGAACAAAATAAAGATAAAGAAACTAGCCAAGAGCCAACA
GTAGATAATCAAAAAGAGCCAGAAAAAGGAGCGAATCATAATGGGTAA

Upstream 100 bases:

>100_bases
GATTTAAAGACAGAACAACTGAAAGATATGTTGTTATCTGAATTTAGTGCGAACGAAAAAACGACTTCTTCGTCTTTATG
GAATTGGAGGAGAAAGCGTC

Downstream 100 bases:

>100_bases
ATATTTTGGTACAGATGGAGTACGCGGGGTTGCGAATAAGGAGTTAACACCTGAATTAGCGTTCAAAATTGGACGTTTTG
GTGGTTATGTATTAACAAAA

Product: ybbr

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEEKYIVSGIPAEGVKVKLEGPK
AAVATAKAKKQFDIPVDLRGSEKGTYEVSLKTNGLPDDVKGTVQPSTIKITLHEKARKYVHVDLKLSNEDQMPAGATLEK
SNIKPDTVEVVGTKEEIESISSAKAYVDLKGVNKTVTKTAEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV
PITYAKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTSVLLPKGVTSAKPNQVKVSVG
VQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISVDISGETSIVDKITAAQITAVINLQNVSPGTKDVAIQVSGP
GNISIEPKQKSAKVTIVKKENPDKEVQGNGEQPNSNNNKDNQTETPKNPEPEPKPDPEKEKEKEKESEQNKDKETSQEPT
VDNQKEPEKGANHNG

Sequences:

>Translated_495_residues
MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEEKYIVSGIPAEGVKVKLEGPK
AAVATAKAKKQFDIPVDLRGSEKGTYEVSLKTNGLPDDVKGTVQPSTIKITLHEKARKYVHVDLKLSNEDQMPAGATLEK
SNIKPDTVEVVGTKEEIESISSAKAYVDLKGVNKTVTKTAEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV
PITYAKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTSVLLPKGVTSAKPNQVKVSVG
VQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISVDISGETSIVDKITAAQITAVINLQNVSPGTKDVAIQVSGP
GNISIEPKQKSAKVTIVKKENPDKEVQGNGEQPNSNNNKDNQTETPKNPEPEPKPDPEKEKEKEKESEQNKDKETSQEPT
VDNQKEPEKGANHNG
>Mature_495_residues
MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEEKYIVSGIPAEGVKVKLEGPK
AAVATAKAKKQFDIPVDLRGSEKGTYEVSLKTNGLPDDVKGTVQPSTIKITLHEKARKYVHVDLKLSNEDQMPAGATLEK
SNIKPDTVEVVGTKEEIESISSAKAYVDLKGVNKTVTKTAEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV
PITYAKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTSVLLPKGVTSAKPNQVKVSVG
VQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISVDISGETSIVDKITAAQITAVINLQNVSPGTKDVAIQVSGP
GNISIEPKQKSAKVTIVKKENPDKEVQGNGEQPNSNNNKDNQTETPKNPEPEPKPDPEKEKEKEKESEQNKDKETSQEPT
VDNQKEPEKGANHNG

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 53547; Mature: 53547

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCEEEEEEECCC
KYIVSGIPAEGVKVKLEGPKAAVATAKAKKQFDIPVDLRGSEKGTYEVSLKTNGLPDDVK
EEEEECCCCCCEEEEECCCCEEEEEHHCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCC
GTVQPSTIKITLHEKARKYVHVDLKLSNEDQMPAGATLEKSNIKPDTVEVVGTKEEIESI
CCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEECHHHHHHH
SSAKAYVDLKGVNKTVTKTAEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV
HCCEEEEEEECCCCEEEEEEEEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCEE
PITYAKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTS
EEEEECCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHCCCCEEEHHHHCCCCCCCCE
VLLPKGVTSAKPNQVKVSVGVQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISV
EECCCCCCCCCCCEEEEEECCCCCCCCHHEEECCEEEECCCCCCCHHHHHCCCCCCEEEE
DISGETSIVDKITAAQITAVINLQNVSPGTKDVAIQVSGPGNISIEPKQKSAKVTIVKKE
EECCCCHHHHHHHHEEEEEEEEEECCCCCCCEEEEEECCCCCEEECCCCCCCEEEEEECC
NPDKEVQGNGEQPNSNNNKDNQTETPKNPEPEPKPDPEKEKEKEKESEQNKDKETSQEPT
CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
VDNQKEPEKGANHNG
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCEEEEEEECCC
KYIVSGIPAEGVKVKLEGPKAAVATAKAKKQFDIPVDLRGSEKGTYEVSLKTNGLPDDVK
EEEEECCCCCCEEEEECCCCEEEEEHHCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCC
GTVQPSTIKITLHEKARKYVHVDLKLSNEDQMPAGATLEKSNIKPDTVEVVGTKEEIESI
CCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEECHHHHHHH
SSAKAYVDLKGVNKTVTKTAEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV
HCCEEEEEEECCCCEEEEEEEEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCEE
PITYAKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTS
EEEEECCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHCCCCEEEHHHHCCCCCCCCE
VLLPKGVTSAKPNQVKVSVGVQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISV
EECCCCCCCCCCCEEEEEECCCCCCCCHHEEECCEEEECCCCCCCHHHHHCCCCCCEEEE
DISGETSIVDKITAAQITAVINLQNVSPGTKDVAIQVSGPGNISIEPKQKSAKVTIVKKE
EECCCCHHHHHHHHEEEEEEEEEECCCCCCCEEEEEECCCCCEEECCCCCCCEEEEEECC
NPDKEVQGNGEQPNSNNNKDNQTETPKNPEPEPKPDPEKEKEKEKESEQNKDKETSQEPT
CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
VDNQKEPEKGANHNG
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]