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The map label for this gene is cysS [H]

Identifier: 222093860

GI number: 222093860

Start: 99678

End: 101075

Strand: Direct

Name: cysS [H]

Synonym: BCQ_0103

Alternate gene names: 222093860

Gene position: 99678-101075 (Clockwise)

Preceding gene: 222093859

Following gene: 222093861

Centisome position: 1.91

GC content: 37.34

Gene sequence:

>1398_bases
ATGACTATTCACATTTATAATACGTTAACACGTCAAAAGGAAGAGTTTATTCCATTAGAAGAAAATAAGGTAAAGATGTA
TGTATGCGGACCTACAGTTTATAACTATATTCACATCGGGAACGCAAGACCACCTATGGTATTTGATACAGTGCGCCGTT
ATTTAGAATATAAAGGATACGATGTGCAGTATGTATCTAACTTTACTGACGTAGATGATAAATTAATTAAAGCGGCAAAT
GAGTTAGGCGAAGATGTGCCGACAATTGCGGACCGTTTCGTGGAAGCGTACTTTGAAGATGTAACGGCACTAGGTTGCAA
ACATGCAACAGTTCATCCGCGTGTAACAGAAAATATGGACATCATTATTGAATTTATTCAAGAACTTGTGAATAAAGGAT
ATGCATATGAATCAGAAGGGGATGTGTACTTTAGAACGAAGGAATTCGAAGGGTACGGTAAGTTATCACATCAACCGATC
GCGGACTTACGTCACGGTGCGCGTATTGAAGTAGGAGAAAAGAAACAAGACCCTCTTGATTTTGCACTATGGAAAGCTGC
GAAAGAAGGAGAAATCTTCTGGGAAAGCCCTTGGGGTCAAGGTCGCCCAGGCTGGCATATCGAGTGCTCGGCAATGGCGC
GTAAATACTTAGGGGATACAATTGATATTCACGCTGGTGGTCAAGACTTGGCATTTCCTCATCACGAGAATGAAATCGCG
CAGTCTGAGGCGTTAACAGGAAAAACATTTGCACGTTATTGGATGCACAATGGATATATTAATATTAATAATGAGAAAAT
GTCTAAGTCACTTGGGAACTTCATTTTAGTTCACGATATCATTAAGCAATATGATCCGCAGTTAATTAGATTCTTTATGC
TATCAGTACATTACCGTCATCCAATTAATTTCAGTGAAGAGTTATTACGAAGCACAAATAACGGACTGGAAAGAATTAAA
ACAGCTTACGGTAATTTAAAACACCGTATGGAAAGTAGTACGGATTTAACAGATCATGATGAGAAGTGGTTAGCTGACCT
GAAAAAATTCCAAACTGCATTTGAAGAAGCGATGAATGATGACTTCAATACTGCCAATGCAATCACTGAGTTATATAATG
TAGCAAATCATGCAAATCAATATTTACTGGAAGAACATACGTCTACAGTGGTAATTCAAGCATACGTAAAACAACTTGAA
ACATTATTTGATATTCTAGGGTTAGAATTAGCGCAAGAAGAGTTACTAGATGAAGAAATTGAAGCGCTTATTCAAAAACG
TATTGAAGCTCGTAAAAATCGTGATTTTGCATTATCAGATCAAATTCGCGATGATTTAAAAGATCGTAATATTATTTTAG
AAGATACCGCTCAAGGTACAAGATGGAAAAGAGGATAA

Upstream 100 bases:

>100_bases
GATCTTCCAGACCCAATTTTTGATAAATTAAAGGTCATGGAAGTAGAACTTGATAAATTGAAAAAACAACTTGAAGTAAA
GGTAGAAAGGAAGGATAAAA

Downstream 100 bases:

>100_bases
GAATGATTGATGCAAAGCAATTAAACAGCTTAGCGTTAGCATATATGGGTGATGCGGTATATGAACAATATATCCGCTAT
CACCTACTTCAAAAAGGGAA

Product: cysteinyl-tRNA synthetase

Products: NA

Alternate protein names: Cysteine--tRNA ligase; CysRS [H]

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYDVQYVSNFTDVDDKLIKAAN
ELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPI
ADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA
QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIK
TAYGNLKHRMESSTDLTDHDEKWLADLKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLE
TLFDILGLELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTRWKRG

Sequences:

>Translated_465_residues
MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYDVQYVSNFTDVDDKLIKAAN
ELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPI
ADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA
QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIK
TAYGNLKHRMESSTDLTDHDEKWLADLKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLE
TLFDILGLELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTRWKRG
>Mature_464_residues
TIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYDVQYVSNFTDVDDKLIKAANE
LGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIA
DLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQ
SEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKT
AYGNLKHRMESSTDLTDHDEKWLADLKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLET
LFDILGLELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTRWKRG

Specific function: Unknown

COG id: COG0215

COG function: function code J; Cysteinyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI13375695, Length=480, Percent_Identity=35.8333333333333, Blast_Score=283, Evalue=3e-76,
Organism=Homo sapiens, GI303304987, Length=316, Percent_Identity=37.3417721518987, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI21269877, Length=316, Percent_Identity=37.3417721518987, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI62240992, Length=316, Percent_Identity=37.3417721518987, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI10835051, Length=316, Percent_Identity=37.3417721518987, Blast_Score=206, Evalue=5e-53,
Organism=Escherichia coli, GI1786737, Length=473, Percent_Identity=44.8202959830867, Blast_Score=395, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI17509797, Length=353, Percent_Identity=31.728045325779, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17509795, Length=353, Percent_Identity=31.728045325779, Blast_Score=180, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6324082, Length=378, Percent_Identity=35.4497354497354, Blast_Score=206, Evalue=4e-54,
Organism=Drosophila melanogaster, GI19922218, Length=504, Percent_Identity=34.1269841269841, Blast_Score=241, Evalue=8e-64,
Organism=Drosophila melanogaster, GI19922364, Length=345, Percent_Identity=31.8840579710145, Blast_Score=176, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015803
- InterPro:   IPR015273
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF09190 DALR_2; PF01406 tRNA-synt_1e [H]

EC number: =6.1.1.16 [H]

Molecular weight: Translated: 53976; Mature: 53845

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY
CEEEEEEHHHHHHHHCCCCCCCCEEEEEECCHHEEEEEECCCCCCHHHHHHHHHHHHCCC
DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD
CEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCEEEECCCCCCCHH
FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA
HHHHHCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHH
QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH
HHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCC
PINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKWLADLKKFQTAFEEAMND
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
DFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLETLFDILGLELAQEELLDEEI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTRWKRG
HHHHHHHHHHHCCCCCEEHHHHHHHHHCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
TIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY
EEEEEEHHHHHHHHCCCCCCCCEEEEEECCHHEEEEEECCCCCCHHHHHHHHHHHHCCC
DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD
CEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCEEEECCCCCCCHH
FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA
HHHHHCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHH
QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH
HHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCC
PINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKWLADLKKFQTAFEEAMND
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
DFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLETLFDILGLELAQEELLDEEI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTRWKRG
HHHHHHHHHHHCCCCCEEHHHHHHHHHCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA