| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
Click here to switch to the map view.
The map label for this gene is 221636292
Identifier: 221636292
GI number: 221636292
Start: 867956
End: 868171
Strand: Reverse
Name: 221636292
Synonym: trd_A0886
Alternate gene names: NA
Gene position: 868171-867956 (Counterclockwise)
Preceding gene: 221636295
Following gene: 221636290
Centisome position: 94.6
GC content: 63.43
Gene sequence:
>216_bases ATGGTGACGCGGACGTATCGGGTTCCGGACGTGAGTTGCCAGCACTGCGTGCGGGCGATCACCGAAGAACTTCGGAAGAT CGCGGGAATCCAGGAGATCGAGGTGGACCTCGCGCAAAAAATCGTGCGCGTCGTGAGCGAGGAGCAGGTGCCCGAGGAAG CGATCCGGAACGGGATCGAGGCAGCCGGCTACACGATCGCTGCTTCGGCGGGCTGA
Upstream 100 bases:
>100_bases CGGACTTGGTCGAGTCAGACCCACGCGGTATAGTGATATGCGATACCCCTGTGGGGTATTCAGCGGCATTGCTGAGGATC ATGATGGTGGGAGGCATGCA
Downstream 100 bases:
>100_bases TCCGAGTGCCCTGGCTTCTCGGCACTGGCCGGGCTGCCTCGCCAGATTTTGCTGGCCTTCATCGATCGACAGCGTCTGAC CCGCGCACCAGCACCGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MVTRTYRVPDVSCQHCVRAITEELRKIAGIQEIEVDLAQKIVRVVSEEQVPEEAIRNGIEAAGYTIAASAG
Sequences:
>Translated_71_residues MVTRTYRVPDVSCQHCVRAITEELRKIAGIQEIEVDLAQKIVRVVSEEQVPEEAIRNGIEAAGYTIAASAG >Mature_71_residues MVTRTYRVPDVSCQHCVRAITEELRKIAGIQEIEVDLAQKIVRVVSEEQVPEEAIRNGIEAAGYTIAASAG
Specific function: Unknown
COG id: COG2608
COG function: function code P; Copper chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7783; Mature: 7783
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS01047 HMA_1 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTRTYRVPDVSCQHCVRAITEELRKIAGIQEIEVDLAQKIVRVVSEEQVPEEAIRNGIE CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHH AAGYTIAASAG HCCEEEECCCC >Mature Secondary Structure MVTRTYRVPDVSCQHCVRAITEELRKIAGIQEIEVDLAQKIVRVVSEEQVPEEAIRNGIE CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHH AAGYTIAASAG HCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA