| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636273
Identifier: 221636273
GI number: 221636273
Start: 847995
End: 848189
Strand: Reverse
Name: 221636273
Synonym: trd_A0867
Alternate gene names: NA
Gene position: 848189-847995 (Counterclockwise)
Preceding gene: 221636274
Following gene: 221636271
Centisome position: 92.42
GC content: 59.49
Gene sequence:
>195_bases GTGGCGAAGGGACAGAACAGCCGAGTGGTGGTCGCAGAGCGGGTGGAGACGGCGGGACAGCCGCTCTTCGGGTACGAGTT CCGCTATGGGTGGGGATTTCTGGCATTCGTGACGTTCGTCGGCATCAACGTCGTGGGGTTGATCATTTGGATGATCATCG CCATCAACTCGCCGACGATTCATCCGTGGCGATGA
Upstream 100 bases:
>100_bases GATATTTTATTTTCTTCGTGAATGGTTTCGCAAAGTGCCAGGGAACGTGGTAGGATAGGGGGAGAGCGATCGCAGCGGCC GAGACTGGGAGGGAACGAGC
Downstream 100 bases:
>100_bases GGTCCGGCTAACACATGACGGCGGTCAACGAACTGGGGGCGCGAGACGCGCCCCCGATTCGTCGTATCTGCCCGAGCAGT CAGGACGAAGTGCTCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MAKGQNSRVVVAERVETAGQPLFGYEFRYGWGFLAFVTFVGINVVGLIIWMIIAINSPTIHPWR
Sequences:
>Translated_64_residues MAKGQNSRVVVAERVETAGQPLFGYEFRYGWGFLAFVTFVGINVVGLIIWMIIAINSPTIHPWR >Mature_63_residues AKGQNSRVVVAERVETAGQPLFGYEFRYGWGFLAFVTFVGINVVGLIIWMIIAINSPTIHPWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7226; Mature: 7094
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGQNSRVVVAERVETAGQPLFGYEFRYGWGFLAFVTFVGINVVGLIIWMIIAINSPTI CCCCCCCEEEEEECHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HPWR CCCC >Mature Secondary Structure AKGQNSRVVVAERVETAGQPLFGYEFRYGWGFLAFVTFVGINVVGLIIWMIIAINSPTI CCCCCCEEEEEECHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HPWR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA