| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636248
Identifier: 221636248
GI number: 221636248
Start: 826496
End: 826657
Strand: Reverse
Name: 221636248
Synonym: trd_A0842
Alternate gene names: NA
Gene position: 826657-826496 (Counterclockwise)
Preceding gene: 221636251
Following gene: 221636247
Centisome position: 90.08
GC content: 55.56
Gene sequence:
>162_bases ATGGAGGCGATGCTGGACACGATGGTGCAGAGGGCGCCCGTCGCAGAAGAGCAAGAGATGGAAGAAGCTACCCTACCGGT CGAAGAAGATGAACTCAGCGAGGAGTTAGTCGAGTTGCTGGTGAAGGAGATCACCATCGACGGCATGTGTGGGGTGTATT GA
Upstream 100 bases:
>100_bases GACAGCGCTCCTATGGGGCGGCTATACTGCGCGTCGGTATTCGGCATGACCTGATCTCTCCAGGCCGAAAGTTGGCGCGA GCGAAACGGAGGAGCCAACC
Downstream 100 bases:
>100_bases TCCAGGGGATGCGCTGGGACAACCGTACCCGACTAGCGCGGTCAGCGGCACTCCGGCCCGAACCGTTCGGGGCGCTCGCC TATACGTATCATGAGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MEAMLDTMVQRAPVAEEQEMEEATLPVEEDELSEELVELLVKEITIDGMCGVY
Sequences:
>Translated_53_residues MEAMLDTMVQRAPVAEEQEMEEATLPVEEDELSEELVELLVKEITIDGMCGVY >Mature_53_residues MEAMLDTMVQRAPVAEEQEMEEATLPVEEDELSEELVELLVKEITIDGMCGVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5988; Mature: 5988
Theoretical pI: Translated: 3.35; Mature: 3.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 9.4 %Met (Translated Protein) 11.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 9.4 %Met (Mature Protein) 11.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAMLDTMVQRAPVAEEQEMEEATLPVEEDELSEELVELLVKEITIDGMCGVY CHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEAMLDTMVQRAPVAEEQEMEEATLPVEEDELSEELVELLVKEITIDGMCGVY CHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA