| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is cutM [H]
Identifier: 221636183
GI number: 221636183
Start: 759044
End: 759922
Strand: Reverse
Name: cutM [H]
Synonym: trd_A0777
Alternate gene names: 221636183
Gene position: 759922-759044 (Counterclockwise)
Preceding gene: 221636185
Following gene: 221636182
Centisome position: 82.8
GC content: 70.19
Gene sequence:
>879_bases GTGGCGATGAAACCGGCAGCTTTTGCCTACGAGCGGCCGGGGACCCTCGGTGAGGCGCTCGAGGCGCTGGCGCGGCATGG TTCGGATGCCCGGCCACTCGCTGGTGGGCAGAGCCTGGTGCCGATGCTGAGCTTGCGGCTGGCGCGTCCAGCGCTCTTGG TCGACCTCGGTCGTCTCGCCGGGCTCGACGAGTTGGTCGTGCGGAATGGTGCGGTCGAGATCGGCGCGATGGTGCGGCAA CGACGGTTGGAGCGTGATCCGCTGGTCGCCCAGCACGTGCCGGTGCTCGCTGCTGCGACACGGTACGTGGGGCATCCCTC GATCCGGAATCGGGGTACGTTGGGCGGGAGCCTGGCTCATGCCGATCCGTCGGCTGAATACCCGGCGGTCGCGCTGGCAG TGGATGCGGAGATGGTCGTCCGCAGCGCACGAGGCGAGCGGACGATCCCGGCACGTGACTTCTTCCTGGGACCCTTCACG ACCGCCCTGGCTGAGGGCGAACTGCTCGTCGCGATCCGTTTTCCCGCATTACCGGCTGGCGCGGGTTGGGGTGTCGAGGA GATCGCGCGGCGGCACGGCGACTTCGCGCTCGCTGGAGCAGTCGCGGTGCTGGAGCGTGGGCCGGACGGAACGTGCAGTC GGGCGAGCGTGGCGCTCTTCGGTGTGGCGACGCGACCGTTGCGGGCGACCGCGGTCGAGCAGGCGCTCGTCGGGCGAGCC CTGGACAGCGCGACGCTGCGTGAAGCAGCCGCTCTTGCGGCGGATGCGATCGACGAGCCGCTTTCCGATGTGCATGGGTC AGCGACGTACCGGCGGCAGATCACGCCCGTGGTGGTGCGACGAGCGATCGAGGCTGCCGCCGCGCGGGCCGGGTTCTGA
Upstream 100 bases:
>100_bases GCTGTCATCGTCGCGGATCCGGAAAGAAGCGTGCTATCTCGGGCTCGTCGGGTTAAGGAGCGGGTCGGGTGTTGTGTTTT TCGGTGGATGAGTGGGGAGG
Downstream 100 bases:
>100_bases GCGAGGGGAGGCGGGGCACGATGCAGCGAGTTCCGATCACGCTGACCGTGAATGGGCGGTCGATTTCTGCCGAGGTCGAA GCGCGCATGACGCTCGCCGA
Product: carbon monoxide dehydrogenase medium chain (COdehydrogenase subunit M) (CO-DH M)
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MAMKPAAFAYERPGTLGEALEALARHGSDARPLAGGQSLVPMLSLRLARPALLVDLGRLAGLDELVVRNGAVEIGAMVRQ RRLERDPLVAQHVPVLAAATRYVGHPSIRNRGTLGGSLAHADPSAEYPAVALAVDAEMVVRSARGERTIPARDFFLGPFT TALAEGELLVAIRFPALPAGAGWGVEEIARRHGDFALAGAVAVLERGPDGTCSRASVALFGVATRPLRATAVEQALVGRA LDSATLREAAALAADAIDEPLSDVHGSATYRRQITPVVVRRAIEAAAARAGF
Sequences:
>Translated_292_residues MAMKPAAFAYERPGTLGEALEALARHGSDARPLAGGQSLVPMLSLRLARPALLVDLGRLAGLDELVVRNGAVEIGAMVRQ RRLERDPLVAQHVPVLAAATRYVGHPSIRNRGTLGGSLAHADPSAEYPAVALAVDAEMVVRSARGERTIPARDFFLGPFT TALAEGELLVAIRFPALPAGAGWGVEEIARRHGDFALAGAVAVLERGPDGTCSRASVALFGVATRPLRATAVEQALVGRA LDSATLREAAALAADAIDEPLSDVHGSATYRRQITPVVVRRAIEAAAARAGF >Mature_291_residues AMKPAAFAYERPGTLGEALEALARHGSDARPLAGGQSLVPMLSLRLARPALLVDLGRLAGLDELVVRNGAVEIGAMVRQR RLERDPLVAQHVPVLAAATRYVGHPSIRNRGTLGGSLAHADPSAEYPAVALAVDAEMVVRSARGERTIPARDFFLGPFTT ALAEGELLVAIRFPALPAGAGWGVEEIARRHGDFALAGAVAVLERGPDGTCSRASVALFGVATRPLRATAVEQALVGRAL DSATLREAAALAADAIDEPLSDVHGSATYRRQITPVVVRRAIEAAAARAGF
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=289, Percent_Identity=31.1418685121107, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1789245, Length=273, Percent_Identity=32.967032967033, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 30502; Mature: 30371
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMKPAAFAYERPGTLGEALEALARHGSDARPLAGGQSLVPMLSLRLARPALLVDLGRLA CCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHC GLDELVVRNGAVEIGAMVRQRRLERDPLVAQHVPVLAAATRYVGHPSIRNRGTLGGSLAH CHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC ADPSAEYPAVALAVDAEMVVRSARGERTIPARDFFLGPFTTALAEGELLVAIRFPALPAG CCCCCCCCEEEEEECHHHHHHHHCCCCCCCHHHHCCCHHHHHHCCCCEEEEEECCCCCCC AGWGVEEIARRHGDFALAGAVAVLERGPDGTCSRASVALFGVATRPLRATAVEQALVGRA CCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHH LDSATLREAAALAADAIDEPLSDVHGSATYRRQITPVVVRRAIEAAAARAGF HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AMKPAAFAYERPGTLGEALEALARHGSDARPLAGGQSLVPMLSLRLARPALLVDLGRLA CCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHC GLDELVVRNGAVEIGAMVRQRRLERDPLVAQHVPVLAAATRYVGHPSIRNRGTLGGSLAH CHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC ADPSAEYPAVALAVDAEMVVRSARGERTIPARDFFLGPFTTALAEGELLVAIRFPALPAG CCCCCCCCEEEEEECHHHHHHHHCCCCCCCHHHHCCCHHHHHHCCCCEEEEEECCCCCCC AGWGVEEIARRHGDFALAGAVAVLERGPDGTCSRASVALFGVATRPLRATAVEQALVGRA CCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHH LDSATLREAAALAADAIDEPLSDVHGSATYRRQITPVVVRRAIEAAAARAGF HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]