| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636169
Identifier: 221636169
GI number: 221636169
Start: 745141
End: 745374
Strand: Reverse
Name: 221636169
Synonym: trd_A0763
Alternate gene names: NA
Gene position: 745374-745141 (Counterclockwise)
Preceding gene: 221636173
Following gene: 221636161
Centisome position: 81.22
GC content: 67.95
Gene sequence:
>234_bases GTGTCCAGGAGCGAGGGACGATTCCCATCCCGGTGTTTCCCTGGGACGCGGGCAATCGGGCAGCGCGGTGTCCCGATCCG TGGGGGCAACCCACCACCGACGACGCGGCTACAGCCCTGTGTTTGTCTCGAAGCCGGATCCAAGCGGAAGCACACTGAGC CCAGCGAGCGGCACCGGGTGCTGGCCGACGAGCGCGTCCCGATGCCGAAGGTCGGGTGCATGCTGTCCACCTGA
Upstream 100 bases:
>100_bases TGGCGGTTCCACCTTTCTGGTTGAAGAACGCGATGACTGGCGTCACGCCTGGCTCCCTGTACGGACACTCGCAGAGGAAG GCTACCAGAGGTCACCGTCT
Downstream 100 bases:
>100_bases ACTGCTCGAGCAGCGCCGAGCCGCGGCGGGCGCGGGCGTAGGTGCCCCACCTGGCCCGAGAGGACCGGCCACCCCAACCG TCTCCGCAGGCACAGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MSRSEGRFPSRCFPGTRAIGQRGVPIRGGNPPPTTRLQPCVCLEAGSKRKHTEPSERHRVLADERVPMPKVGCMLST
Sequences:
>Translated_77_residues MSRSEGRFPSRCFPGTRAIGQRGVPIRGGNPPPTTRLQPCVCLEAGSKRKHTEPSERHRVLADERVPMPKVGCMLST >Mature_76_residues SRSEGRFPSRCFPGTRAIGQRGVPIRGGNPPPTTRLQPCVCLEAGSKRKHTEPSERHRVLADERVPMPKVGCMLST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8470; Mature: 8339
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSEGRFPSRCFPGTRAIGQRGVPIRGGNPPPTTRLQPCVCLEAGSKRKHTEPSERHRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHCC LADERVPMPKVGCMLST CCCCCCCCCCCCEEECC >Mature Secondary Structure SRSEGRFPSRCFPGTRAIGQRGVPIRGGNPPPTTRLQPCVCLEAGSKRKHTEPSERHRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHCC LADERVPMPKVGCMLST CCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA