Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636133

Identifier: 221636133

GI number: 221636133

Start: 715955

End: 717223

Strand: Reverse

Name: 221636133

Synonym: trd_A0727

Alternate gene names: NA

Gene position: 717223-715955 (Counterclockwise)

Preceding gene: 221636134

Following gene: 221636132

Centisome position: 78.15

GC content: 62.1

Gene sequence:

>1269_bases
GTGTCGAGTGTGGCAGTCGGGGTTGTTCGCGTCGTGAAGAGCCTGCCGATGCTGCTTTGGCGAGCGGCGAGCCGACCGAT
CAGTGGTGGAGCGGCGGCAGTCCTAATCGTGCTCGCGTTCGTGCTCGGCTCGACGTTGCCAGTCCTCGCCACGCGTTGGG
TCGGTGAGGGGCATCGCATGCCGGCGCCACCGCCGCAGTGGGCGATCGATCCGGCGCGACCGAAGGAAGGATGCATCTAT
TTCCCCGAGACACAGCATAATCTCTGTGGTGGCTTTCGTCAGTATTGGGAGCAGTATGGTGGACTACTGATGTTCGGGTA
TCCATTGACGGAAGAGTACTCTGCACCTGAGCTGGGTGAAAATGGTGTTGTTACACAGTGGTTCGAGCGAGCGCGGTTTG
AATGGCATCCCGGGAAGATTCCGGCGCGCAACGATGTGCTCCAGGGGCATCTGGGCAGAGAGATCATGGCGATTCTAACC
GAGAATCGGCGGGAGGGTCATCCGCCCAGCGGATGGTCGCCACCGTCCTCCGGAGCGACGGCAACTCCCTGGCCGACGCC
GACCCCGGTGCCGACACCGACCCCGACGCCGACGCCGACTGCTGCACCGATCACCACGCTACCGATGCCGACCCCGACGG
TGACACCGGCGCTACCGCCCATCGTCGAGCTCCCGACCCCGACGCCCACGGCCACTGCCGGGCTTCCATCGATGCCGCAG
CAGGCCGATCCGGTGACGACGCATCCGGACATCGCCCGAGCCTGGGCTGACATCGCTCAGGAACTCCAGATCTCCCCGAG
CTTCTGGTCGACCTATTATCGCAACACGCCTCCTGAAGTGATGGCCGAGATCCAGCTGTATTGTCGGTATTATCCCGTCT
GTATCGATATGGTCAATTATCAGTGGTGGCTTGGTTATGTGAATCTGCACTTGCCGATGCCGCGCGACTTCAATCCGACG
GTGCTGCCGCCGCGTTTCCTGTACGCGGGGTACGGGACGTGCCCTGGGCCATGGCGATACTCCGCTTTGTGGTATATCGT
GCGGACCACCAATACTCGCTGCACCTTCGCGTGGACGTGGAGTCCCGGATTGCTGAGTCCCTCGCTGCCGACTGGCGACC
CGAACGACCTGAGCTATTGGTACGACTGGTTCCCGAGCTTGACCATGAGCGAAGTCCAACCAGTCGTGCGGCAGTACCAA
GGGAATCCGTACCTGATCGCCAAGGAGCTCTATCGTCTGCGCTGGATGAAGGCTCGACCCTCCTCCTGA

Upstream 100 bases:

>100_bases
CCCGATTACTGCCAGATTGACGGTCGGTGCTGACTTTGCTAGCCTTCGTTGGTGACGCCGGATAGTGGCTGATGTTCGGT
AAATTAAGGTGGGAGTGATG

Downstream 100 bases:

>100_bases
CCGAGTCACGGGTCAAAGGGGTGGGATCGGGAACGATCCGATCAATCAGCTGACTGCTCGGCGGACGGGGCGTGCTCGGG
CGAGACGGCGAGCGCTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSSVAVGVVRVVKSLPMLLWRAASRPISGGAAAVLIVLAFVLGSTLPVLATRWVGEGHRMPAPPPQWAIDPARPKEGCIY
FPETQHNLCGGFRQYWEQYGGLLMFGYPLTEEYSAPELGENGVVTQWFERARFEWHPGKIPARNDVLQGHLGREIMAILT
ENRREGHPPSGWSPPSSGATATPWPTPTPVPTPTPTPTPTAAPITTLPMPTPTVTPALPPIVELPTPTPTATAGLPSMPQ
QADPVTTHPDIARAWADIAQELQISPSFWSTYYRNTPPEVMAEIQLYCRYYPVCIDMVNYQWWLGYVNLHLPMPRDFNPT
VLPPRFLYAGYGTCPGPWRYSALWYIVRTTNTRCTFAWTWSPGLLSPSLPTGDPNDLSYWYDWFPSLTMSEVQPVVRQYQ
GNPYLIAKELYRLRWMKARPSS

Sequences:

>Translated_422_residues
MSSVAVGVVRVVKSLPMLLWRAASRPISGGAAAVLIVLAFVLGSTLPVLATRWVGEGHRMPAPPPQWAIDPARPKEGCIY
FPETQHNLCGGFRQYWEQYGGLLMFGYPLTEEYSAPELGENGVVTQWFERARFEWHPGKIPARNDVLQGHLGREIMAILT
ENRREGHPPSGWSPPSSGATATPWPTPTPVPTPTPTPTPTAAPITTLPMPTPTVTPALPPIVELPTPTPTATAGLPSMPQ
QADPVTTHPDIARAWADIAQELQISPSFWSTYYRNTPPEVMAEIQLYCRYYPVCIDMVNYQWWLGYVNLHLPMPRDFNPT
VLPPRFLYAGYGTCPGPWRYSALWYIVRTTNTRCTFAWTWSPGLLSPSLPTGDPNDLSYWYDWFPSLTMSEVQPVVRQYQ
GNPYLIAKELYRLRWMKARPSS
>Mature_421_residues
SSVAVGVVRVVKSLPMLLWRAASRPISGGAAAVLIVLAFVLGSTLPVLATRWVGEGHRMPAPPPQWAIDPARPKEGCIYF
PETQHNLCGGFRQYWEQYGGLLMFGYPLTEEYSAPELGENGVVTQWFERARFEWHPGKIPARNDVLQGHLGREIMAILTE
NRREGHPPSGWSPPSSGATATPWPTPTPVPTPTPTPTPTAAPITTLPMPTPTVTPALPPIVELPTPTPTATAGLPSMPQQ
ADPVTTHPDIARAWADIAQELQISPSFWSTYYRNTPPEVMAEIQLYCRYYPVCIDMVNYQWWLGYVNLHLPMPRDFNPTV
LPPRFLYAGYGTCPGPWRYSALWYIVRTTNTRCTFAWTWSPGLLSPSLPTGDPNDLSYWYDWFPSLTMSEVQPVVRQYQG
NPYLIAKELYRLRWMKARPSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47244; Mature: 47112

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVAVGVVRVVKSLPMLLWRAASRPISGGAAAVLIVLAFVLGSTLPVLATRWVGEGHRM
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
PAPPPQWAIDPARPKEGCIYFPETQHNLCGGFRQYWEQYGGLLMFGYPLTEEYSAPELGE
CCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC
NGVVTQWFERARFEWHPGKIPARNDVLQGHLGREIMAILTENRREGHPPSGWSPPSSGAT
CCCHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ATPWPTPTPVPTPTPTPTPTAAPITTLPMPTPTVTPALPPIVELPTPTPTATAGLPSMPQ
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
QADPVTTHPDIARAWADIAQELQISPSFWSTYYRNTPPEVMAEIQLYCRYYPVCIDMVNY
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
QWWLGYVNLHLPMPRDFNPTVLPPRFLYAGYGTCPGPWRYSALWYIVRTTNTRCTFAWTW
EEEEEEEEEEECCCCCCCCCCCCCHHHEECCCCCCCCCCEEEEEEEEEECCCEEEEEEEC
SPGLLSPSLPTGDPNDLSYWYDWFPSLTMSEVQPVVRQYQGNPYLIAKELYRLRWMKARP
CCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCC
SS
CC
>Mature Secondary Structure 
SSVAVGVVRVVKSLPMLLWRAASRPISGGAAAVLIVLAFVLGSTLPVLATRWVGEGHRM
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
PAPPPQWAIDPARPKEGCIYFPETQHNLCGGFRQYWEQYGGLLMFGYPLTEEYSAPELGE
CCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC
NGVVTQWFERARFEWHPGKIPARNDVLQGHLGREIMAILTENRREGHPPSGWSPPSSGAT
CCCHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ATPWPTPTPVPTPTPTPTPTAAPITTLPMPTPTVTPALPPIVELPTPTPTATAGLPSMPQ
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
QADPVTTHPDIARAWADIAQELQISPSFWSTYYRNTPPEVMAEIQLYCRYYPVCIDMVNY
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
QWWLGYVNLHLPMPRDFNPTVLPPRFLYAGYGTCPGPWRYSALWYIVRTTNTRCTFAWTW
EEEEEEEEEEECCCCCCCCCCCCCHHHEECCCCCCCCCCEEEEEEEEEECCCEEEEEEEC
SPGLLSPSLPTGDPNDLSYWYDWFPSLTMSEVQPVVRQYQGNPYLIAKELYRLRWMKARP
CCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCC
SS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA