| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636084
Identifier: 221636084
GI number: 221636084
Start: 669504
End: 669635
Strand: Reverse
Name: 221636084
Synonym: trd_A0678
Alternate gene names: NA
Gene position: 669635-669504 (Counterclockwise)
Preceding gene: 221636086
Following gene: 221636083
Centisome position: 72.97
GC content: 67.42
Gene sequence:
>132_bases ATGGCGACCTCCGGGTGGCACGCGTGCAGTGCCGAGTACAAGAACGGGTTAGCACGCGAGGGGCGGACCGACAAGGTGGG TGTGCGGAGGAACGAGACGTGGGGCGAGCCTCACGCTGGTCGGGTGGACTGA
Upstream 100 bases:
>100_bases CAGAGATCGACGCGAAACTGTCCCTCGCCAGCAGCGTGGACGCGGCTTCCAGCTTCGCGGTAGACGGTCGACAGTGGTAT GACGGCGAGCGGAGCCAGGC
Downstream 100 bases:
>100_bases ATCGATCGGGTCGGTTCGACGCACTCACCGTTTTCCACCTGAGCGCTTGACGCTGGCAGGTGAGGCTGGGAGCTGGAGCC TGCGGCAGCGGTGCTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 43; Mature: 42
Protein sequence:
>43_residues MATSGWHACSAEYKNGLAREGRTDKVGVRRNETWGEPHAGRVD
Sequences:
>Translated_43_residues MATSGWHACSAEYKNGLAREGRTDKVGVRRNETWGEPHAGRVD >Mature_42_residues ATSGWHACSAEYKNGLAREGRTDKVGVRRNETWGEPHAGRVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4757; Mature: 4626
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSGWHACSAEYKNGLAREGRTDKVGVRRNETWGEPHAGRVD CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ATSGWHACSAEYKNGLAREGRTDKVGVRRNETWGEPHAGRVD CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA